RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 DNASE1L2Q92874 299 aa15.83■□□□□ 0.12
HMGXB3-202ENST00000503427 SP140LQ9H930 580 aa15.83■□□□□ 0.12
HMGXB3-202ENST00000503427 PI15O43692 258 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 POU2F1P14859 743 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 HTRA3P83110 453 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 NFKB2Q00653 900 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 CXorf57Q6NSI4 855 aaKnown RBP15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 PDSS2Q86YH6 399 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 MINDY2Q8NBR6 621 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 PIWIL1Q96J94 861 aaKnown RBP15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 EFCAB9A8MZ26 197 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 STX16-NPEPL1H3BU86 382 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 STX16O14662 325 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 BCAS2O75934 225 aaPredicted RBP15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 PGLSO95336 258 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 CMPK1P30085 196 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 HSPB3Q12988 150 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 UPP1Q16831 310 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 TXNDC8Q6A555 127 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 GPR153Q6NV75 609 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 PQLC3Q8N755 202 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 TRPV3Q8NET8 790 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 TRIB2Q92519 343 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 PKP2Q99959 881 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 SIRPGQ9P1W8 387 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 DLDP09622 509 aaKnown RBP15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 KCNQ1P51787 676 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 PDGFRLQ15198 375 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 BRAT1Q6PJG6 821 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 VITQ6UXI7 678 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 OR2AP1Q8NGE2 309 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 C11orf16Q9NQ32 467 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 TMEM233B4DJY2 109 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 HCRTO43612 131 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 CCNFP41002 786 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 ABATP80404 500 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 GRSF1Q12849 480 aaKnown RBP eCLIP15.82■□□□□ 0.122e-8■■■□□ 18.5
HMGXB3-202ENST00000503427 SPATS1Q496A3 300 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 GDPD4Q6W3E5 623 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 ZNF563Q8TA94 476 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 AUTS2Q8WXX7 1259 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 CNPPD1Q9BV87 410 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 USP29Q9HBJ7 922 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 NKIRAS2Q9NYR9 191 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 UBR2Q8IWV8 1755 aa15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 TRPM3Q9HCF6 1732 aaPredicted RBP15.82■□□□□ 0.12
HMGXB3-202ENST00000503427 OR1F1O43749 312 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 VARSP26640 1264 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 TMEM44Q2T9K0 475 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 PLEKHG6Q3KR16 790 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 KLHL22Q53GT1 634 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 PDE12Q6L8Q7 609 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 GPR135Q8IZ08 494 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 TAMM41Q96BW9 452 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ZNF354BQ96LW1 612 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 TAS2R7Q9NYW3 318 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 INSL5Q9Y5Q6 135 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 DNAJA1P31689 397 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 GSK3BP49841 420 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ZNF311Q5JNZ3 666 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 JAZF1Q86VZ6 243 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 CELF5Q8N6W0 485 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 C9orf43Q8TAL5 461 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ZBED6CLQ96FA7 236 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ZBED3Q96IU2 234 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 CDK15Q96Q40 435 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ELAC1Q9H777 363 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 CREBZFQ9NS37 354 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 TMEM248Q9NWD8 314 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 PDLIM1O00151 329 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ENPP3O14638 875 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 AZGP1P25311 298 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ITPKBP27987 946 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 CBX3Q13185 183 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 SERINC3Q13530 473 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 C15orf39Q6ZRI6 1047 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 FIZ1Q96SL8 496 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 AGRPO00253 132 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 WNT9AO14904 365 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 FAM189A1O60320 539 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 SUZ12Q15022 739 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 TOMM20Q15388 145 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 MS4A13Q5J8X5 152 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 RANBP3LQ86VV4 465 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 TMEM126BQ8IUX1 230 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 PEX5LQ8IYB4 626 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 MTERF1Q99551 399 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 MOV10Q9HCE1 1003 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ZDHHC3Q9NYG2 299 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 RPL36Q9Y3U8 105 aaKnown RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 PDPK1O15530 556 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ARFIP1P53367 373 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 NDUFA9Q16795 377 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 IQCCQ4KMZ1 466 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 ERMP1Q7Z2K6 904 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 TMBIM1Q969X1 311 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 MIPEPQ99797 713 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 POLMQ9NP87 494 aaPredicted RBP15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 CKLFQ9UBR5 152 aa15.81■□□□□ 0.12
HMGXB3-202ENST00000503427 PTBP2Q9UKA9 531 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms