RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PAFAH2Q99487 392 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 OCIAD1Q9NX40 245 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 IKZF3Q9UKT9 509 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 PDE10AQ9Y233 779 aa24.29■■□□□ 1.48
LSM6-202ENST00000502781 IGF2RP11717 2491 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 B4E171 279 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 PHGDHO43175 533 aaKnown RBP24.28■■□□□ 1.48
LSM6-202ENST00000502781 BRINP1O60477 761 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 JMJD7P0C870 316 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 MAP4P27816 1152 aaKnown RBP24.28■■□□□ 1.48
LSM6-202ENST00000502781 ETV5P41161 510 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 TSPAN7P41732 249 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 CYP4F3Q08477 520 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 SLC29A2Q14542 456 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 RAB42Q8N4Z0 105 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 LMNTD1Q8N9Z9 388 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 UBXN10Q96LJ8 280 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 DHRS4Q9BTZ2 278 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 B3GNT4Q9C0J1 378 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 PARVBQ9HBI1 364 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.28■■□□□ 1.48
LSM6-202ENST00000502781 LNPEPQ9UIQ6 1025 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 ZNF180Q9UJW8 692 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 AK5Q9Y6K8 562 aa24.28■■□□□ 1.48
LSM6-202ENST00000502781 V9GYY5 206 aaPredicted RBP24.28■■□□□ 1.48
LSM6-202ENST00000502781 CDRT15L2A8MXV6 281 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 TNFSF15O95150 251 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 SLC16A8O95907 504 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 HSD17B2P37059 387 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 SEPHS1P49903 392 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 PHKG1Q16816 387 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 MCOLN3Q8TDD5 553 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 SLC22A18Q96BI1 424 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 DERL2Q9GZP9 239 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 CAMSAP3Q9P1Y5 1249 aaPredicted RBP24.27■■□□□ 1.48
LSM6-202ENST00000502781 PISDQ9UG56 409 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 BTRCQ9Y297 605 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 APC2O95996 2303 aa24.27■■□□□ 1.48
LSM6-202ENST00000502781 A0A1W2PPV9 198 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 EFCAB7A8K855 629 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 AGRPO00253 132 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 ZBTB11O95625 1053 aaPredicted RBP24.26■■□□□ 1.47
LSM6-202ENST00000502781 INHBAP08476 426 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 CYP2A7P20853 494 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 CDH3P22223 829 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 GCAP28676 217 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 MC2RQ01718 297 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 BMPR2Q13873 1038 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 SLC5A12Q1EHB4 618 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 MROH9Q5TGP6 573 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 FBXO38Q6PIJ6 1188 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 SBSNQ6UWP8 590 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 CMC1Q7Z7K0 106 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 CLEC14AQ86T13 490 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 D2HGDHQ8N465 521 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 C2orf73Q8N5S3 287 aaPredicted RBP24.26■■□□□ 1.47
LSM6-202ENST00000502781 MDM1Q8TC05 714 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 ZNF480Q8WV37 535 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 DCAKDQ8WVC6 231 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 FETUBQ9UGM5 382 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 NOVA2Q9UNW9 492 aaKnown RBP24.26■■□□□ 1.47
LSM6-202ENST00000502781 PCDHGA7Q9Y5G6 932 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 PCDHGA3Q9Y5H0 932 aa24.26■■□□□ 1.47
LSM6-202ENST00000502781 EXOC1LA0A1B0GW35 172 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 ISM1B1AKI9 464 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 ENO2P09104 434 aaPredicted RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 SLC35E2BP0CK96 405 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 CRABP2P29373 138 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 RBMS1P29558 406 aaKnown RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 MSH2P43246 934 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 SERPINB9P50453 376 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 ERVPABLB-1P60509 514 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 FASTKQ14296 549 aaKnown RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 UAP1Q16222 522 aaPredicted RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 PPP1R3AQ16821 1122 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 FOXR1Q6PIV2 292 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 LRRC56Q8IYG6 542 aaPredicted RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 AENQ8WTP8 325 aaKnown RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 ISL2Q96A47 359 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 CCDC138Q96M89 665 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 ZNF578Q96N58 590 aaPredicted RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 TRAPPC9Q96Q05 1148 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 CCDC86Q9H6F5 360 aaKnown RBP24.25■■□□□ 1.47
LSM6-202ENST00000502781 FBXO8Q9NRD0 319 aa24.25■■□□□ 1.47
LSM6-202ENST00000502781 ASPMQ8IZT6 3477 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 SLC9B1P1A6NJY1 282 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 E7ENX8 843 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 CDC7O00311 574 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 NVLO15381 856 aaKnown RBP24.24■■□□□ 1.47
LSM6-202ENST00000502781 FKBP9O95302 570 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 ST6GAL1P15907 406 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 IMPA1P29218 277 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 OAS2P29728 719 aaKnown RBP24.24■■□□□ 1.47
LSM6-202ENST00000502781 SLC26A3P40879 764 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 PNLIPRP1P54315 467 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 HSD11B2P80365 405 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 TAP2Q03519 686 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 TBC1D25Q3MII6 688 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 CCDC91Q7Z6B0 441 aa24.24■■□□□ 1.47
LSM6-202ENST00000502781 TRIM73Q86UV7 250 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms