RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MBD3O95983 291 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 PRSS56P0CW18 603 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 TPBGLP0DKB5 382 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 PEBP1P30086 187 aaKnown RBP13.36□□□□□ -0.27
CCDC58-207ENST00000498466 ADRA1AP35348 466 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 SLC1A1P43005 524 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 GCGRP47871 477 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 TPM4P67936 248 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 TAZQ16635 292 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 ITPRIPL1Q6GPH6 555 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 MTFR2Q6P444 385 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 TMEM207Q6UWW9 146 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 RHOT2Q8IXI1 618 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 METTL27Q8N6F8 245 aaPredicted RBP13.36□□□□□ -0.27
CCDC58-207ENST00000498466 OR5K2Q8NHB8 316 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 ELMO1Q92556 727 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 TAAR6Q96RI8 345 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 CRB3Q9BUF7 120 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 C10orf88Q9H8K7 445 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 ZNF160Q9HCG1 818 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 CUTCQ9NTM9 273 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 SH3BGRL2Q9UJC5 107 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 AAR2Q9Y312 384 aaKnown RBP13.36□□□□□ -0.27
CCDC58-207ENST00000498466 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 NUP210LQ5VU65 1888 aa13.36□□□□□ -0.27
CCDC58-207ENST00000498466 TRAV17A0A0B4J275 112 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 H7C0C1 242 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 AKR1B10O60218 316 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 AP2A2O94973 939 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 UNC5CO95185 931 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 AP2A1O95782 977 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 ONECUT2O95948 504 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 HPP00738 406 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 ACPPP15309 386 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 COMTP21964 271 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 MCM3P25205 808 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 ACADLP28330 430 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 RBL1P28749 1068 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 OR1D4P47884 311 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 ATP5OP48047 213 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 GRM7Q14831 915 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 IQCB1Q15051 598 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 INAQ16352 499 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 SYTL3Q4VX76 610 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 TFDP3Q5H9I0 405 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 RPTNQ6XPR3 784 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 MICALCLQ6ZW33 695 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 TTC29Q8NA56 475 aaPredicted RBP13.35□□□□□ -0.27
CCDC58-207ENST00000498466 CCDC110Q8TBZ0 833 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 DNAJC1Q96KC8 554 aaKnown RBP13.35□□□□□ -0.27
CCDC58-207ENST00000498466 TRIM8Q9BZR9 551 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 PLA2G3Q9NZ20 509 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 SMARCAL1Q9NZC9 954 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.35□□□□□ -0.27
CCDC58-207ENST00000498466 PTGFRNQ9P2B2 879 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 MAU2Q9Y6X3 613 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 HIVEP1P15822 2718 aa13.35□□□□□ -0.27
CCDC58-207ENST00000498466 NF1P21359 2839 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 TRBV5-4A0A0C4DH59 114 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 MAP2K7O14733 419 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 USP1O94782 785 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 FTH1P02794 183 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 UQCRHP07919 91 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 PSMB4P28070 264 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 GRIA3P42263 894 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 CARSP49589 748 aaKnown RBP13.34□□□□□ -0.27
CCDC58-207ENST00000498466 TNFSF10P50591 281 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 MSLNQ13421 630 aaPredicted RBP13.34□□□□□ -0.27
CCDC58-207ENST00000498466 ASTE1Q2TB18 679 aaPredicted RBP13.34□□□□□ -0.27
CCDC58-207ENST00000498466 ZC3H12BQ5HYM0 836 aaKnown RBP13.34□□□□□ -0.27
CCDC58-207ENST00000498466 TCTE1Q5JU00 501 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 YOD1Q5VVQ6 348 aaPredicted RBP13.34□□□□□ -0.27
CCDC58-207ENST00000498466 NAPRTQ6XQN6 538 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 NLRP9Q7RTR0 991 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 TMTC1Q8IUR5 882 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 CCDC50Q8IVM0 306 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 KBTBD2Q8IY47 623 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 PRSS58Q8IYP2 241 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 C8orf44Q96CB5 159 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 C19orf43Q9BQ61 176 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 FERMT1Q9BQL6 677 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 MESP1Q9BRJ9 268 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCDC58-207ENST00000498466 IL1RAPL1Q9NZN1 696 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 SEC14L3Q9UDX4 400 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 ZGRF1Q86YA3 2104 aa13.34□□□□□ -0.27
CCDC58-207ENST00000498466 hCG_1818297A0A087WSY0 165 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 VSTM2BA6NLU5 285 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 QSOX1O00391 747 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 PSTPIP1O43586 416 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 F10P00742 488 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 PKLRP30613 574 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 NSG1P42857 185 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 CA7P43166 264 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 RAB28P51157 221 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 OCA2Q04671 838 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 SRSF11Q05519 484 aaKnown RBP13.33□□□□□ -0.28
CCDC58-207ENST00000498466 RBPJQ06330 500 aa13.33□□□□□ -0.28
CCDC58-207ENST00000498466 KLC1Q07866 573 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms