RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 CES3Q6UWW8 571 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 TMEM135Q86UB9 458 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 APLFQ8IW19 511 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 CFAP61Q8NHU2 1237 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 MAGEC3Q8TD91 643 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 SKA2Q8WVK7 121 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 RAD51AP1Q96B01 352 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 ZNF669Q96BR6 464 aaPredicted RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 RUFY1Q96T51 708 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 DHRS4Q9BTZ2 278 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 FAM60AQ9NP50 221 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 INTS7Q9NVH2 962 aaKnown RBP15.16■□□□□ 0.02
HDAC4-213ENST00000496347 SNX7Q9UNH6 387 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 LRRK2Q5S007 2527 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 PCM1Q15154 2024 aa15.16■□□□□ 0.02
HDAC4-213ENST00000496347 PRRC2CQ9Y520 2896 aaKnown RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 PTPN13Q12923 2485 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 RP1L1Q8IWN7 2480 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 GOLGA8KD6RF30 607 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 H3BMH7 237 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 GOLGA8TH3BQL2 631 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 ZNF749O43361 778 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 USP1O94782 785 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 TCP1P17987 556 aaKnown RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 GABRA4P48169 554 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 TERF1P54274 439 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 RPS18P62269 152 aaKnown RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 KCTD19Q17RG1 926 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 DEFB110Q30KQ9 67 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 ANKRD20A4Q4UJ75 823 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 RHBDD2Q6NTF9 364 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 TLDC1Q6P9B6 456 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 FAM199XQ6PEV8 388 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 LMNTD2Q8IXW0 634 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 PPIL6Q8IXY8 311 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 ENDOVQ8N8Q3 282 aaKnown RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 NAT8LQ8N9F0 302 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 HMGCLL1Q8TB92 370 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 SLCO2A1Q92959 643 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 AKIRIN1Q9H9L7 192 aaPredicted RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 SPATA7Q9P0W8 599 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 SLC39A10Q9ULF5 831 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 FARSAQ9Y285 508 aaKnown RBP15.15■□□□□ 0.02
HDAC4-213ENST00000496347 MED13Q9UHV7 2174 aa15.15■□□□□ 0.02
HDAC4-213ENST00000496347 ANKRD12Q6UB98 2062 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 E5RI56 91 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 GOLGA8MH3BSY2 632 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 NIPSNAP2O75323 286 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 C1orf105O95561 183 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 MAGP20916 626 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 AGXTP21549 392 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 FMO4P31512 558 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 BDKRB1P46663 353 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 NAA25Q14CX7 972 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 PPP1R7Q15435 360 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 ZNF385CQ66K41 422 aaPredicted RBP15.14■□□□□ 0.01
HDAC4-213ENST00000496347 CNSTQ6PJW8 725 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 CENPUQ71F23 418 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 ZBTB2Q8N680 514 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 CALML6Q8TD86 181 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 ANP32BQ92688 251 aaKnown RBP15.14■□□□□ 0.01
HDAC4-213ENST00000496347 ABHD17AQ96GS6 310 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 FAM114A2Q9NRY5 505 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 ANAPC2Q9UJX6 822 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 TCFL5Q9UL49 500 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 PLCL2Q9UPR0 1127 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 CRYL1Q9Y2S2 319 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 NUP210LQ5VU65 1888 aa15.14■□□□□ 0.01
HDAC4-213ENST00000496347 ZCWPW2A0A1B0GU75 182 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 MATN4O95460 622 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 PKMP14618 531 aaKnown RBP15.13■□□□□ 0.01
HDAC4-213ENST00000496347 NFKB2Q00653 900 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 THOC5Q13769 683 aaKnown RBP15.13■□□□□ 0.01
HDAC4-213ENST00000496347 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 PTCHD3Q3KNS1 767 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 TTLL9Q3SXZ7 439 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 RNASEH2BQ5TBB1 312 aaKnown RBP15.13■□□□□ 0.01
HDAC4-213ENST00000496347 TCTN3Q6NUS6 607 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 TAX1BP1Q86VP1 789 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 DNAJC22Q8N4W6 341 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 ADAMTS17Q8TE56 1095 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 DENND1AQ8TEH3 1009 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 DLG3Q92796 817 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 KCNJ9Q92806 393 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 IL17FQ96PD4 163 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 TRIM56Q9BRZ2 755 aaKnown RBP15.13■□□□□ 0.01
HDAC4-213ENST00000496347 FAM167BQ9BTA0 163 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 CCDC68Q9H2F9 335 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 ENAMQ9NRM1 1142 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 IRAK4Q9NWZ3 460 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 KLHL42Q9P2K6 505 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 PCYOX1Q9UHG3 505 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 RUVBL2Q9Y230 463 aaKnown RBP15.13■□□□□ 0.01
HDAC4-213ENST00000496347 KLK4Q9Y5K2 254 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 NFS1Q9Y697 457 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 MAD1L1Q9Y6D9 718 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 COMMD10Q9Y6G5 202 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 HEATR5BQ9P2D3 2071 aa15.13■□□□□ 0.01
HDAC4-213ENST00000496347 CTAGE9A4FU28 777 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms