RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 FAM162AQ96A26 154 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 OTUB2Q96DC9 234 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 MPP4Q96JB8 637 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ZSCAN5AQ9BUG6 496 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 KCNH6Q9H252 994 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 C11orf49Q9H6J7 331 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ADGRE2Q9UHX3 823 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 TMPRSS11EQ9UL52 423 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 SLC22A14Q9Y267 594 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 PTPRSQ13332 1948 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 CROCCQ5TZA2 2017 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 KCNE1BA0A087WTH5 132 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 SERTM1A2A2V5 107 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 C16orf96A6NNT2 1141 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 UPK3BL1B0FP48 263 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 UPK3BL2E5RIL1 263 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 NPIPB8E9PQR5 432 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 H0YAE9 185 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 KIAA0355O15063 1070 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 UGDHO60701 494 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 MTX2O75431 263 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 LEFTY1O75610 366 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ALBP02768 609 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 HOXB6P17509 224 aaKnown RBP10.79□□□□□ -0.68
CMSS1-208ENST00000496116 MAP4P27816 1152 aaKnown RBP10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ALDH3B2P48448 385 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ESRRGP62508 458 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 HTRA4P83105 476 aaPredicted RBP10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF33BQ06732 778 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF284Q2VY69 593 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 PLPP4Q5VZY2 271 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 FRG2Q64ET8 278 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ATG9BQ674R7 924 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 NEK5Q6P3R8 708 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 DNAJC14Q6Y2X3 702 aaPredicted RBP10.79□□□□□ -0.68
CMSS1-208ENST00000496116 DDHD1Q8NEL9 900 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 CSGALNACT1Q8TDX6 532 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 SCAMP4Q969E2 229 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 TESCQ96BS2 214 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 PYCR2Q96C36 320 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 ITCHQ96J02 903 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 FRG2BQ96QU4 278 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 P2RY13Q9BPV8 354 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 SLC25A37Q9NYZ2 338 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 LIMD1Q9UGP4 676 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 MAN2B2Q9Y2E5 1009 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 INSL6Q9Y581 213 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 DOCK6Q96HP0 2047 aa10.79□□□□□ -0.68
CMSS1-208ENST00000496116 A0A096LPI6 279 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 FAM220BPB1ANY3 271 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 CXCR6O00574 342 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 SEC24DO94855 1032 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PRSS23O95084 383 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 RHOP08100 348 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 GSTM1P09488 218 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 JUPP14923 745 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 CDH2P19022 906 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 HALP42357 657 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MTHFRP42898 656 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ALDH3A2P51648 485 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 NEK2P51955 445 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ARSFP54793 590 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ERVFC1P60507 584 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 GSTM4Q03013 218 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 RBBP5Q15291 538 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ZNF77Q15935 545 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PLA2G4EQ3MJ16 856 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 CYBRD1Q53TN4 286 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ARSIQ5FYB1 569 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 LRIF1Q5T3J3 769 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 LIPJQ5W064 366 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 TMEM214Q6NUQ4 689 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 SERPINA13PQ6UXR4 307 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 HSD11B1LQ7Z5J1 315 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 NECAB2Q7Z6G3 386 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 CLEC4FQ8N1N0 589 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 BEND7Q8N7W2 519 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MRPL43Q8N983 215 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ATL1Q8WXF7 558 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 SLC47A1Q96FL8 570 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 LRIG1Q96JA1 1093 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 LINC00597Q9H2U6 94 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 KAT8Q9H7Z6 458 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PCDH12Q9NPG4 1184 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MARK1Q9P0L2 795 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 NFKBIL1Q9UBC1 381 aaPredicted RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 RSL24D1Q9UHA3 163 aaKnown RBP10.78□□□□□ -0.68
CMSS1-208ENST00000496116 IL36AQ9UHA7 158 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 DLGAP4Q9Y2H0 992 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 PCDHB14Q9Y5E9 798 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 CEPT1Q9Y6K0 416 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 TSPAN11A1L157 253 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 H3BSA7 217 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MOSPD3O75425 235 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 RFPL2O75678 378 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 SLCO2B1O94956 709 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 RETP07949 1114 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 ETV3P41162 512 aa10.78□□□□□ -0.68
CMSS1-208ENST00000496116 MAPK9P45984 424 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms