RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 CDK15Q96Q40 435 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 MVB12BQ9H7P6 319 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 WASH6PQ9NQA3 447 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 RIC8BQ9NVN3 520 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 A0A1B0GTL3 188 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 CLGNO14967 610 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 MAP3K13O43283 966 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 HNRNPCL1O60812 293 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 ITPKAP23677 461 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 BLKP51451 505 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 PNLIPRP1P54315 467 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 KRT33BQ14525 404 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 LPCAT2Q7L5N7 544 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 IQCHQ86VS3 1027 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 HID1Q8IV36 788 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 FERD3LQ96RJ6 166 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 ORAI3Q9BRQ5 295 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 RAB11FIP5Q9BXF6 653 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 SPATA6Q9NWH7 488 aaPredicted RBP23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 DLGAP2Q9P1A6 1054 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 TDRKHQ9Y2W6 561 aaKnown RBP23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 PLEKHM1Q9Y4G2 1056 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 TIMM22Q9Y584 194 aa23.69■■□□□ 1.38
PPP1R3F-205ENST00000495799 SPTY2D1-AS1A0A0U1RR47 76 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 ADSLP30566 484 aaPredicted RBP23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 IRX1P78414 480 aaPredicted RBP23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 CTBSQ01459 385 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 ILF3Q12906 894 aaKnown RBP eCLIP23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 ZXDCQ2QGD7 858 aaPredicted RBP23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 MFSD2AQ8NA29 543 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 SLC6A18Q96N87 628 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 INSM2Q96T92 566 aaPredicted RBP23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 MIPEPQ99797 713 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 CCDC177Q9NQR7 707 aaPredicted RBP23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 WDR37Q9Y2I8 494 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 DYRK1BQ9Y463 629 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 ST14Q9Y5Y6 855 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 KCNE2Q9Y6J6 123 aa23.68■■□□□ 1.38
PPP1R3F-205ENST00000495799 LRP4O75096 1905 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 KRT87PA6NCN2 255 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 SLC22A2O15244 555 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 PI15O43692 258 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 KRT6AP02538 564 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 KRT6BP04259 564 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 NDUFS1P28331 727 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 KRT6CP48668 564 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 LIPJQ5W064 366 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 ABRAXAS1Q6UWZ7 409 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 SLC22A18ASQ8N1D0 253 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 DCBLD1Q8N8Z6 715 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 L3MBTL4Q8NA19 623 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 SETD7Q8WTS6 366 aaKnown RBP23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 CCDC106Q9BWC9 280 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 IMP3Q9NV31 184 aaKnown RBP23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 SLC12A4Q9UP95 1085 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 INVSQ9Y283 1065 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 COLEC10Q9Y6Z7 277 aa23.67■■□□□ 1.38
PPP1R3F-205ENST00000495799 ERGP11308 486 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 EPORP19235 508 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 AOC1P19801 751 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 ACTR1BP42025 376 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 ACTR1AP61163 376 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 TBPL1P62380 186 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 RACK1P63244 317 aaKnown RBP23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 IRF8Q02556 426 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 PCDH1Q08174 1060 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 MYLK4Q86YV6 388 aaPredicted RBP23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 TUBGCP3Q96CW5 907 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 SGPP1Q9BX95 441 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 GSDMCQ9BYG8 508 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 INTS7Q9NVH2 962 aaKnown RBP23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 CIDEBQ9UHD4 219 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 PCOLCE2Q9UKZ9 415 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 SNX6Q9UNH7 406 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 BTRCQ9Y297 605 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 RNF11Q9Y3C5 154 aa23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 CFAP20Q9Y6A4 193 aaKnown RBP23.66■■□□□ 1.38
PPP1R3F-205ENST00000495799 GNAZP19086 355 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 CD38P28907 300 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 RASSF2P50749 326 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 IL27RAQ6UWB1 636 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 LARP4Q71RC2 724 aaKnown RBP eCLIP23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 PARGQ86W56 976 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 PPFIBP2Q8ND30 876 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 HAUS8Q9BT25 410 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 PCBD2Q9H0N5 130 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 TMEM168Q9H0V1 697 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 TUBB1Q9H4B7 451 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 PRDM8Q9NQV8 689 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 ARMCX1Q9P291 453 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 CAPN7Q9Y6W3 813 aa23.65■■□□□ 1.38
PPP1R3F-205ENST00000495799 E7ENX8 843 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 SLC28A1O00337 649 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 UBDO15205 165 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 UNC5CO95185 931 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 LINC00032P0C843 101 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 MTHFD1P11586 935 aaKnown RBP23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 HNF4AP41235 474 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 TAP2Q03519 686 aa23.64■■□□□ 1.38
PPP1R3F-205ENST00000495799 ZNF33BQ06732 778 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms