RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FZD10Q9ULW2 581 aa8.41□□□□□ -1.06
GARNL3-219ENST00000495172 MTMR6Q9Y217 621 aa8.41□□□□□ -1.06
GARNL3-219ENST00000495172 A0A1W2PQ67 120 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 TUBAL3A6NHL2 446 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 SYT5O00445 386 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 CD5LO43866 347 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 VEGFDO43915 354 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 SEC24DO94855 1032 aaPredicted RBP8.4□□□□□ -1.06
GARNL3-219ENST00000495172 MYBL2P10244 700 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 CD46P15529 392 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 UGT2B7P16662 529 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 PTH2RP49190 550 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 STX17P56962 302 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 TMEM115Q12893 351 aaPredicted RBP8.4□□□□□ -1.06
GARNL3-219ENST00000495172 PRKG2Q13237 762 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 ATP13A4Q4VNC1 1196 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 FOXD4L5Q5VV16 416 aaPredicted RBP8.4□□□□□ -1.06
GARNL3-219ENST00000495172 KIAA0930Q6ICG6 404 aaPredicted RBP8.4□□□□□ -1.06
GARNL3-219ENST00000495172 SLC25A25Q6KCM7 469 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 TLDC1Q6P9B6 456 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 SPESP1Q6UW49 350 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 KDELC1Q6UW63 502 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 DET1Q7L5Y6 550 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 NLRP9Q7RTR0 991 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 ZNF227Q86WZ6 799 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 ARIH2OSQ8N7S6 290 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 FOXD4L4Q8WXT5 416 aaPredicted RBP8.4□□□□□ -1.06
GARNL3-219ENST00000495172 CENPIQ92674 756 aaPredicted RBP8.4□□□□□ -1.06
GARNL3-219ENST00000495172 NTAN1Q96AB6 310 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 MIEF2Q96C03 454 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 C1orf159Q96HA4 380 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 CCL19Q99731 98 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 UTP23Q9BRU9 249 aaKnown RBP8.4□□□□□ -1.06
GARNL3-219ENST00000495172 CNPPD1Q9BV87 410 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 CUTCQ9NTM9 273 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 PKD2L2Q9NZM6 624 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 PCDHA7Q9UN72 937 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 SHOC2Q9UQ13 582 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 ALG6Q9Y672 507 aa8.4□□□□□ -1.06
GARNL3-219ENST00000495172 ARHGAP21Q5T5U3 1957 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 A8MV72 311 aaPredicted RBP8.39□□□□□ -1.07
GARNL3-219ENST00000495172 KDM4EB2RXH2 506 aaPredicted RBP8.39□□□□□ -1.07
GARNL3-219ENST00000495172 DSCR3O14972 297 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 TP53P04637 393 aaPredicted RBP8.39□□□□□ -1.07
GARNL3-219ENST00000495172 PIM1P11309 404 aaPredicted RBP8.39□□□□□ -1.07
GARNL3-219ENST00000495172 VCLP18206 1134 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 SLC9A1P19634 815 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 BMP5P22003 454 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 FDXRP22570 491 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 ACVR2AP27037 513 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 RFC1P35251 1148 aaPredicted RBP8.39□□□□□ -1.07
GARNL3-219ENST00000495172 SOX18P35713 384 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 GRIA3P42263 894 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 PRCPP42785 496 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 EMP2P54851 167 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 ITKQ08881 620 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 KRT33BQ14525 404 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 RFTN1Q14699 578 aaPredicted RBP8.39□□□□□ -1.07
GARNL3-219ENST00000495172 QPCTQ16769 361 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 SLC25A35Q3KQZ1 300 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 ATP13A5Q4VNC0 1218 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 NAA35Q5VZE5 725 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 TTI2Q6NXR4 508 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 TMEM220Q6QAJ8 160 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 C12orf54Q6X4T0 127 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 TMEM178AQ8NBL3 297 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 OR52E1Q8NGJ3 308 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 FLVCR1-AS1Q8TAF5 88 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 GDAP1Q8TB36 358 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 LRRN4Q8WUT4 740 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 IMMP1LQ96LU5 166 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 OR2A14Q96R47 310 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 PLCD4Q9BRC7 762 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 BPIFA1Q9NP55 256 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 EURLQ9NYK6 297 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 LIPGQ9Y5X9 500 aa8.39□□□□□ -1.07
GARNL3-219ENST00000495172 A0A1B0GVL5 298 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 OR2W5A6NFC9 320 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 GABRR3A8MPY1 467 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 C2orf74A8MZ97 194 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 FOXN3O00409 490 aaPredicted RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 EEF2KO00418 725 aaKnown RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 FGF10O15520 208 aaPredicted RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 SIAH2O43255 324 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 CCP110O43303 1012 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 GPRIN2O60269 458 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 PRMT3O60678 531 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 SOX30O94993 753 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 ONECUT2O95948 504 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 ERCC2P18074 760 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 SYT1P21579 422 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 CARSP49589 748 aaKnown RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 AGFG1P52594 562 aaKnown RBP8.38□□□□□ -1.07
GARNL3-219ENST00000495172 SNX16P57768 344 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 GPR85P60893 370 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 CCDC40Q4G0X9 1142 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 VWA3BQ502W6 1294 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 MIDNQ504T8 468 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 ANKRD20A8PQ5CZ79 823 aa8.38□□□□□ -1.07
GARNL3-219ENST00000495172 METRNLQ641Q3 311 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms