RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 MSH2P43246 934 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 RAB10P61026 200 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 SHC2P98077 582 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 TSNQ15631 228 aaKnown RBP10.76□□□□□ -0.69
APTX-230ENST00000494649 ARHGAP22Q7Z5H3 698 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 SYTL1Q8IYJ3 562 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 OR9A1PQ8NGU1 263 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 OR2W6PQ8NHA6 318 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 WDR36Q8NI36 951 aaKnown RBP10.76□□□□□ -0.69
APTX-230ENST00000494649 ZFPM2Q8WW38 1151 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 SLC44A1Q8WWI5 657 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 ATG10Q9H0Y0 220 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 EPB41L1Q9H4G0 881 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 IGF2RP11717 2491 aa10.76□□□□□ -0.69
APTX-230ENST00000494649 GFYI3L273 518 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 EBLN1P0CF75 366 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 GCAP28676 217 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 TNFRSF8P28908 595 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 ARL4DP49703 201 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 SQSTM1Q13501 440 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 DEFB110Q30KQ9 67 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 AGBL5Q8NDL9 886 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 MAGEC3Q8TD91 643 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 ZNF480Q8WV37 535 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 DCAKDQ8WVC6 231 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 GATA6Q92908 595 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 PYCR2Q96C36 320 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 MED8Q96G25 268 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 LIN37Q96GY3 246 aaPredicted RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 PRR11Q96HE9 360 aaPredicted RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 OR2A14Q96R47 310 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 MIPEPQ99797 713 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 POLR1BQ9H9Y6 1135 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 SNX15Q9NRS6 342 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 KLHL42Q9P2K6 505 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 POMT2Q9UKY4 750 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 FAM221BA6H8Z2 402 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 ALDOAP04075 364 aaKnown RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 SLC35E2BP0CK96 405 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 FOLR1P15328 257 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 CCNFP41002 786 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 GRIA3P42263 894 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 GLRBP48167 497 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 DLG1Q12959 904 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 NAB1Q13506 487 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 SF1Q15637 639 aaKnown RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 C18orf21Q32NC0 220 aaPredicted RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 ANKS6Q68DC2 871 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 SPESP1Q6UW49 350 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 UNQ6494/PRO21346Q6UXR6 183 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 NEK10Q6ZWH5 1172 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 KCTD4Q8WVF5 259 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 USP7Q93009 1102 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 OR6C1Q96RD1 312 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 TMEM121BQ9BXQ6 578 aaPredicted RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 VPS11Q9H270 941 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 SYTL2Q9HCH5 934 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 ARL15Q9NXU5 204 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 OR6C2Q9NZP2 312 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 FOXJ2Q9P0K8 574 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 AKAP7Q9P0M2 348 aaPredicted RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.75□□□□□ -0.69
APTX-230ENST00000494649 PDP2Q9P2J9 529 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 LNPEPQ9UIQ6 1025 aa10.75□□□□□ -0.69
APTX-230ENST00000494649 TLCD2A6NGC4 264 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 TRIM49D1C9J1S8 452 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 MYO1CO00159 1063 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 HCRTR1O43613 425 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 CYP2A7P20853 494 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 MAGP20916 626 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 IMPA1P29218 277 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 TYK2P29597 1187 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 HSD17B3P37058 310 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 PNLIPRP1P54315 467 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 GPR19Q15760 415 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 ZKSCAN8Q15776 578 aaPredicted RBP10.74□□□□□ -0.69
APTX-230ENST00000494649 ZIC1Q15915 447 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 THEMIS2Q5TEJ8 643 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 PRAMEF17Q5VTA0 474 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 SBSNQ6UWP8 590 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 NKAPQ8N5F7 415 aaKnown RBP10.74□□□□□ -0.69
APTX-230ENST00000494649 OR2L8Q8NGY9 312 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 FLVCR1-AS1Q8TAF5 88 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 MCOLN3Q8TDD5 553 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 EPS8L3Q8TE67 593 aaKnown RBP10.74□□□□□ -0.69
APTX-230ENST00000494649 NXPE2Q96DL1 559 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 TSPAN17Q96FV3 270 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 SLC12A9Q9BXP2 914 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 FUT8Q9BYC5 575 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 ZNF768Q9H5H4 540 aaKnown RBP10.74□□□□□ -0.69
APTX-230ENST00000494649 PARVBQ9HBI1 364 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 ZNF358Q9NW07 568 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 EPHA6Q9UF33 1036 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 TAC3Q9UHF0 121 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 B3GALT1Q9Y5Z6 326 aa10.74□□□□□ -0.69
APTX-230ENST00000494649 SNRNP200O75643 2136 aaKnown RBP10.74□□□□□ -0.69
APTX-230ENST00000494649 A0A096LPK6 155 aa10.73□□□□□ -0.69
APTX-230ENST00000494649 A0A1W2PPV9 198 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms