RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 FAM83HQ6ZRV2 1179 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-225ENST00000494465 MINDY1Q8N5J2 469 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 IL17RCQ8NAC3 791 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 OR56A3Q8NH54 315 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 ATL1Q8WXF7 558 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 FOPNLQ96NB1 174 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 ABCD2Q9UBJ2 740 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 SUCOQ9UBS9 1254 aaKnown RBP16.07■□□□□ 0.16
ATG4B-225ENST00000494465 PRKAB1Q9Y478 270 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 RNASEH2AO75792 299 aaKnown RBP16.07■□□□□ 0.16
ATG4B-225ENST00000494465 ACADLP28330 430 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 VHLP40337 213 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 NEK2P51955 445 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 SLC7A2P52569 658 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 CHIT1Q13231 466 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 NAE1Q13564 534 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 PLA2G4EQ3MJ16 856 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 HM13Q8TCT9 377 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 NUDT8Q8WV74 236 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 LRRC58Q96CX6 371 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 ASB9Q96DX5 294 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 HOPXQ9BPY8 73 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-225ENST00000494465 SLC6A17Q9H1V8 727 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 IL1RL2Q9HB29 575 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 LRTM1Q9HBL6 345 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 LRRC42Q9Y546 428 aa16.07■□□□□ 0.16
ATG4B-225ENST00000494465 A0A1W2PQF6 199 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 MGAT4DA6NG13 374 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 COL9A1P20849 921 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 JAK1P23458 1154 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 TRIM25Q14258 630 aaKnown RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 COL13A1Q5TAT6 717 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 PPFIBP2Q8ND30 876 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 SELENOMQ8WWX9 145 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 TEX101Q9BY14 249 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 DPEP2Q9H4A9 486 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 ASIC5Q9NY37 505 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 GMPR2Q9P2T1 348 aaKnown RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 SNX6Q9UNH7 406 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 CCDC154A6NI56 674 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 NME4O00746 187 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 UGDHO60701 494 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 JUPP14923 745 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 SLC6A2P23975 617 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 PCDH1Q08174 1060 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 PRKG2Q13237 762 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 CAPRIN1Q14444 709 aaKnown RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 PTGR1Q14914 329 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 IMPG1Q17R60 797 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 TIGD2Q4W5G0 525 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 SAMD4BQ5PRF9 694 aaKnown RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 SWT1Q5T5J6 900 aaKnown RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 DOK6Q6PKX4 331 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 TP53I13Q8NBR0 393 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 BHLHE22Q8NFJ8 381 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-225ENST00000494465 PCDHAC1Q9H158 963 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 OR52A5Q9H2C5 316 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 ELOVL6Q9H5J4 265 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 NMRK1Q9NWW6 199 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 C1orf109Q9NX04 203 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 FBXL12Q9NXK8 326 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 SLC23A2Q9UGH3 650 aa16.06■□□□□ 0.16
ATG4B-225ENST00000494465 SERTM1A2A2V5 107 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 E7EQ34 232 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 BAG2O95816 211 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 PRPH2P23942 346 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 HALP42357 657 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 INPP5AQ14642 412 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 PON2Q15165 354 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 IRF4Q15306 451 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 HABP4Q5JVS0 413 aaKnown RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 LIPJQ5W064 366 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 SUSD1Q6UWL2 747 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 SLC15A3Q8IY34 581 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 SPDYE1Q8NFV5 336 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 ZNF480Q8WV37 535 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 MED8Q96G25 268 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 ZDHHC5Q9C0B5 715 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 MRPL40Q9NQ50 206 aaKnown RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 GID8Q9NWU2 228 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 SLAMF8Q9P0V8 285 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 PRUNE2Q8WUY3 3088 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 NPIPB8E9PQR5 432 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 PLRG1O43660 514 aaKnown RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 SEC22BO75396 215 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 PAK4O96013 591 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 TRIM23P36406 574 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 CCR3P51677 355 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 ATXN3P54252 364 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 IRF8Q02556 426 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 PLOD1Q02809 727 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 FOXM1Q08050 763 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 MAD2L1Q13257 205 aaPredicted RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 C6orf10Q5SRN2 563 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 FRG2Q64ET8 278 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 PRMT9Q6P2P2 845 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 TRMT11Q7Z4G4 463 aaKnown RBP16.05■□□□□ 0.16
ATG4B-225ENST00000494465 FRG2BQ96QU4 278 aa16.05■□□□□ 0.16
ATG4B-225ENST00000494465 TTYH1Q9H313 450 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms