RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 NTAN1Q96AB6 310 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 PPP1R36Q96LQ0 422 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 TBCDQ9BTW9 1192 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 KIFC1Q9BW19 673 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 CIPCQ9C0C6 399 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 GOLPH3Q9H4A6 298 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 SPATA6Q9NWH7 488 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-222ENST00000493919 VSX1Q9NZR4 365 aaPredicted RBP11.35□□□□□ -0.59
BRCA1-222ENST00000493919 MPP6Q9NZW5 540 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 EIF3KQ9UBQ5 218 aaKnown RBP11.35□□□□□ -0.59
BRCA1-222ENST00000493919 PCDHA13Q9Y5I0 950 aa11.35□□□□□ -0.59
BRCA1-222ENST00000493919 USP34Q70CQ2 3546 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 GPR171O14626 319 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 HSPA4LO95757 839 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 FTCDO95954 541 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 CD48P09326 243 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 NR4A1P22736 598 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 MIPP30301 263 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 TIE1P35590 1138 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 GPR3P46089 330 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 CPA2P48052 419 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 RIDAP52758 137 aaKnown RBP11.34□□□□□ -0.59
BRCA1-222ENST00000493919 IRX4P78413 519 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 ALDH6A1Q02252 535 aaKnown RBP11.34□□□□□ -0.59
BRCA1-222ENST00000493919 FZD5Q13467 585 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 PIGHQ14442 188 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-222ENST00000493919 DNAL1Q4LDG9 190 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 ZMAT1Q5H9K5 638 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 OGFOD2Q6N063 350 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 RTL4Q6ZR62 310 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 CDH24Q86UP0 819 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 PYROXD2Q8N2H3 581 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 OXR1Q8N573 874 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 SLC35G2Q8TBE7 412 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 UFD1Q92890 307 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 PEBP4Q96S96 227 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 SNRNP25Q9BV90 132 aaKnown RBP11.34□□□□□ -0.59
BRCA1-222ENST00000493919 FAM126AQ9BYI3 521 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-222ENST00000493919 MAGEB5Q9BZ81 275 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 CHRDQ9H2X0 955 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.34□□□□□ -0.59
BRCA1-222ENST00000493919 OR12D3Q9UGF7 316 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 AP4E1Q9UPM8 1137 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 NFS1Q9Y697 457 aa11.34□□□□□ -0.59
BRCA1-222ENST00000493919 ZNF318Q5VUA4 2279 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 TMEM120BA0PK00 339 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF879B4DU55 563 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 FAM72CH0Y354 149 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 K7EQS6 105 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 PIAS2O75928 621 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CNTN5O94779 1100 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 KCNH1O95259 989 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 COX5BP10606 129 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 PRPS2P11908 318 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 BMP2P12643 396 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CDH1P12830 882 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 TCF4P15884 667 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 RBL1P28749 1068 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CD70P32970 193 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 RPS9P46781 194 aaKnown RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 LMAN2Q12907 356 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 MTAPQ13126 283 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 GAS6Q14393 721 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 MESDQ14696 234 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 SLC9A5Q14940 896 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZMYND11Q15326 602 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 YIF1BQ5BJH7 314 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 FAM72AQ5TYM5 149 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 FAM72DQ6L9T8 149 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 PKN3Q6P5Z2 889 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ARPINQ7Z6K5 226 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 FAM72BQ86X60 149 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 MPP5Q8N3R9 675 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 C10orf53Q8N6V4 93 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 BEND7Q8N7W2 519 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZNF557Q8N988 423 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CLDN23Q96B33 292 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 LRRC39Q96DD0 335 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 SLC2A11Q9BYW1 496 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 DHX35Q9H5Z1 703 aaKnown RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 NDE1Q9NXR1 346 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 COA4Q9NYJ1 87 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 BCAP29Q9UHQ4 241 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 FZD10Q9ULW2 581 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 USP18Q9UMW8 372 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ZFR2Q9UPR6 939 aaKnown RBP11.33□□□□□ -0.6
BRCA1-222ENST00000493919 ANGPT2O15123 496 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 LRIG2O94898 1065 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 RASAL1O95294 804 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 SHBGP04278 402 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 SERPINF2P08697 491 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 CISD3P0C7P0 127 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 WNT5AP41221 380 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 MMP13P45452 471 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 TPMTP51580 245 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 SCAPQ12770 1279 aa11.33□□□□□ -0.6
BRCA1-222ENST00000493919 RIN1Q13671 783 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms