RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 AGO3Q9H9G7 860 aaKnown RBP7.72□□□□□ -1.17
BRCA1-221ENST00000493795 PCYT1BQ9Y5K3 369 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-221ENST00000493795 C5orf60A6NFR6 353 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 ANKRD63C9JTQ0 380 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 RPP14O95059 124 aaKnown RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 AGR2O95994 175 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 PRNPP04156 253 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 GLDCP23378 1020 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 NDUFV1P49821 464 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 OAZ1P54368 228 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 ADGRE1Q14246 886 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 SH3D19Q5HYK7 790 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 CRB2Q5IJ48 1285 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 CLNKQ7Z7G1 428 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 FAM110BQ8TC76 370 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 EPS8L1Q8TE68 723 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 STYXQ8WUJ0 223 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 TRAPPC12Q8WVT3 735 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 PTPN18Q99952 460 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 PBDC1Q9BVG4 233 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 TMED9Q9BVK6 235 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 FTHL17Q9BXU8 183 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 DUSP16Q9BY84 665 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 SYT4Q9H2B2 425 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 RANBP3Q9H6Z4 567 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 BRF2Q9HAW0 419 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 SDHAF3Q9NRP4 125 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 VNN3Q9NY84 501 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 PCDHGA8Q9Y5G5 932 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 NR2E3Q9Y5X4 410 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 TTC37Q6PGP7 1564 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 ZNF705EA8MWA4 302 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 MEN1O00255 615 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 SLITRK3O94933 977 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 CYP11A1P05108 521 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 C8GP07360 202 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 TPSB2P20231 275 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 CCNHP51946 323 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 NCBP2P52298 156 aaKnown RBP eCLIP7.71□□□□□ -1.175e-10■■■■■ 33.9
BRCA1-221ENST00000493795 RTP1P59025 263 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 CHIT1Q13231 466 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 TPSAB1Q15661 275 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 BATFQ16520 125 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 COL28A1Q2UY09 1125 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 C6orf183Q5T699 404 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 ARL9Q6T311 187 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 LAS2Q8IYD9 372 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 OR4K2Q8NGD2 314 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 GRHL3Q8TE85 626 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 ZBTB45Q96K62 511 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 GPR21Q99679 349 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 NUSAP1Q9BXS6 441 aaKnown RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 NMUR2Q9GZQ4 415 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 DENND2DQ9H6A0 471 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-221ENST00000493795 PLEKHA3Q9HB20 300 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 NDUFAF4Q9P032 175 aa7.71□□□□□ -1.17
BRCA1-221ENST00000493795 TRBV23OR9-2A0A075B6M9 112 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 H6PDO95479 791 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 C8BP07358 591 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 F8A1P23610 371 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 HOXC8P31273 242 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 HSPA7P48741 367 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TOB1P50616 345 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 MRPS6P82932 125 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 FOXM1Q08050 763 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SNTA1Q13424 505 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TUSC3Q13454 348 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 GANABQ14697 944 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 CNPY1Q3B7I2 92 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF34Q8IZ26 560 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 KLHL6Q8WZ60 621 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 MALSU1Q96EH3 234 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 FEM1CQ96JP0 617 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SLC38A3Q99624 504 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 NPLQ9BXD5 320 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 RAB11FIP5Q9BXF6 653 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SRMSQ9H3Y6 488 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 MANSC4A6NHS7 340 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 A8MUI8 341 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 SLC19A2O60779 497 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 GABBR2O75899 941 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 RCBTB2O95199 551 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 PRKCIP41743 596 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ALDH3B2P48448 385 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 FXYD6P3P58550 94 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TAS2R43P59537 309 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 BNIP1Q12981 228 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 CLCA4Q14CN2 919 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TARBP2Q15633 366 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 NPTX1Q15818 432 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 CHRFAM7AQ494W8 412 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 GPR158Q5T848 1215 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 RHBDF2Q6PJF5 856 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ZNF598Q86UK7 904 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 ERI1Q8IV48 349 aaKnown RBP7.71□□□□□ -1.18
BRCA1-221ENST00000493795 OR6K2Q8NGY2 324 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 COPS5Q92905 334 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TAS2R10Q9NYW0 307 aa7.71□□□□□ -1.18
BRCA1-221ENST00000493795 TBC1D14Q9P2M4 693 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms