RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 KIF17Q9P2E2 1029 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 PCTPQ9UKL6 214 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 TMPRSS11EQ9UL52 423 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 PCDHGB2Q9Y5G2 931 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 THSD7AQ9UPZ6 1657 aa11.44□□□□□ -0.58
HDAC4-210ENST00000493582 UBA6A0AVT1 1052 aaPredicted RBP11.43□□□□□ -0.58
HDAC4-210ENST00000493582 NPEPPSL1A6NEC2 478 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 PER2O15055 1255 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 PTHP01270 115 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 STSP08842 583 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 INSRRP14616 1297 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 AKAP5P24588 427 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 CCR1P32246 355 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 CD86P42081 329 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 RGS6P49758 472 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 DAOAP59103 153 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 ELP6Q0PNE2 266 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 FAPQ12884 760 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 TARDBPQ13148 414 aaKnown RBP eCLIP11.43□□□□□ -0.583e-6■■■■□ 23.4
HDAC4-210ENST00000493582 GALNT3Q14435 633 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 KCTD2Q14681 263 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 SNX20Q7Z614 316 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 MILR1Q7Z6M3 343 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 LRRC52Q8N7C0 313 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 METTL6Q8TCB7 284 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 KIAA1191Q96A73 305 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 NUSAP1Q9BXS6 441 aaKnown RBP11.43□□□□□ -0.58
HDAC4-210ENST00000493582 MFSD1Q9H3U5 465 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 SYTL2Q9HCH5 934 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 SIRT5Q9NXA8 310 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 GPR83Q9NYM4 423 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 TAS2R16Q9NYV7 291 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 KLK14Q9P0G3 267 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 EIF2B4Q9UI10 523 aaKnown RBP11.43□□□□□ -0.58
HDAC4-210ENST00000493582 IPPQ9Y573 584 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 PARP14Q460N5 1801 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 A0A0B4J293 547 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 A0A1W2PQ09 198 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 SPANXN4Q5MJ08 99 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 FAM171A1Q5VUB5 890 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 OR2T5Q6IEZ7 315 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 LETMD1Q6P1Q0 360 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 PLPPR4Q7Z2D5 763 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 SDR16C5Q8N3Y7 309 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 YIPF7Q8N8F6 280 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 OR2T29Q8NH02 315 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 GPR151Q8TDV0 419 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 TTC9Q92623 222 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 FCGR1BQ92637 280 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 FUBP1Q96AE4 644 aaKnown RBP11.43□□□□□ -0.58
HDAC4-210ENST00000493582 RNF31Q96EP0 1072 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 TEPSINQ96N21 525 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 MIOSQ9NXC5 875 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 PCDHB5Q9Y5E4 795 aa11.43□□□□□ -0.58
HDAC4-210ENST00000493582 BTN3A1O00481 513 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TSPAN9O75954 239 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 RETP07949 1114 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 FHP07954 510 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 CCNYL3P0C7X3 344 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 PIRTP0C851 137 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 CYP2A6P11509 494 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 SLC2A4P14672 509 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 IGFBP6P24592 240 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 NKX3-2P78367 333 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 NPRL3Q12980 569 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 KIAA0040Q15053 153 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ZBTB6Q15916 424 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 PM20D1Q6GTS8 502 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 KDELC1Q6UW63 502 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ADAMTSL2Q86TH1 951 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 CACTIN-AS1Q8N1I8 211 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 NLGN1Q8N2Q7 840 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 FBXL6Q8N531 539 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 KRTCAP2Q8N6L1 136 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ZNF557Q8N988 423 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 GGHQ92820 318 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TNIP3Q96KP6 325 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 NFKBIZQ9BYH8 718 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 HEBP1Q9NRV9 189 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TMEM30AQ9NV96 361 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ERVW-1Q9UQF0 538 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 GRXCR2A6NFK2 248 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 LEUTXA8MZ59 168 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 CD3EAPO15446 510 aaKnown RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 HBP1O60381 514 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 GLP2RO95838 553 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 MYCP01106 439 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 CNPP09543 421 aaKnown RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 PSKH1P11801 424 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 NUDT1P36639 197 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TBCEQ15813 527 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ESCO2Q56NI9 601 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ST13P5Q8NFI4 369 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 OR56A4Q8NGH8 313 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 CLHC1Q8NHS4 586 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 ZFAND1Q8TCF1 268 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 FAM120BQ96EK7 910 aaKnown RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 KCNC2Q96PR1 638 aa11.42□□□□□ -0.58
HDAC4-210ENST00000493582 TSEN34Q9BSV6 310 aaKnown RBP11.42□□□□□ -0.58
HDAC4-210ENST00000493582 R3HDMLQ9H3Y0 253 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms