RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 RBMS3Q6XE24 437 aaKnown RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 ISCA2Q86U28 154 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 LGI2Q8N0V4 545 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 EID3Q8N140 333 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 RYBPQ8N488 228 aaPredicted RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 ANKRD13CQ8N6S4 541 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 ZNF383Q8NA42 475 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 HSD17B8Q92506 261 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 HES6Q96HZ4 224 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 RMDN2Q96LZ7 410 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 THUMPD3Q9BV44 507 aaKnown RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 MMP28Q9H239 520 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 ZWILCHQ9H900 591 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 CDH20Q9HBT6 801 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 INTS10Q9NVR2 710 aaKnown RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.66□□□□□ -1.82
CLK1-213ENST00000492793 TXNDC16Q9P2K2 825 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 LRWD1Q9UFC0 647 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 KCNG2Q9UJ96 466 aa3.66□□□□□ -1.82
CLK1-213ENST00000492793 EME2A4GXA9 379 aaPredicted RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 ANXA2P2A6NMY6 339 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 WDR46O15213 610 aaKnown RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 RNASEH1O60930 286 aaKnown RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 RPS6KA5O75582 802 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 MOCS3O95396 460 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 TCEA1P23193 301 aaKnown RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 ACAT1P24752 427 aaKnown RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 CRKLP46109 303 aaKnown RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 LINC01547P58512 204 aaPredicted RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 KCNJ10P78508 379 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 ZNF273Q14593 569 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 CA9Q16790 459 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 LRRC73Q5JTD7 316 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 ENPP7Q6UWV6 458 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 SH2D5Q6ZV89 423 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 FAM219AQ8IW50 185 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 OR4K1Q8NGD4 311 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 OR10V1Q8NGI7 309 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 VANGL1Q8TAA9 524 aaPredicted RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 KCNE4Q8WWG9 221 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 ATP6V1E2Q96A05 226 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 EXOC4Q96A65 974 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 MUS81Q96NY9 551 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 RAD9AQ99638 391 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 CITED2Q99967 270 aaPredicted RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 SNX25Q9H3E2 840 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 FZD8Q9H461 694 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 FN3KQ9H479 309 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 CHCHD3Q9NX63 227 aaKnown RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 SPHK1Q9NYA1 384 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 SNX7Q9UNH6 387 aa3.65□□□□□ -1.83
CLK1-213ENST00000492793 SOS1Q07889 1333 aaPredicted RBP3.65□□□□□ -1.83
CLK1-213ENST00000492793 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 LOC101059948A0A1B0GTJ6 334 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 A0A1W2PPW3 197 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 PTGESO14684 152 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 ZNF197O14709 1029 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 TSHBP01222 138 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 IGHV4-38-2P0DP08 117 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 LIFP15018 202 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 IFNAR1P17181 557 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 HOXB6P17509 224 aaKnown RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 CDC25CP30307 473 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 CEACAM8P31997 349 aaPredicted RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 DCTP40126 519 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 LIMK1P53667 647 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 UBASH3AP57075 661 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 MAT1AQ00266 395 aaKnown RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 ITGA7Q13683 1181 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 PHKG1Q16816 387 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 ZC2HC1CQ53FD0 456 aaPredicted RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 SLC35E4Q6ICL7 350 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 TRAT1Q6PIZ9 186 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 MOXD1Q6UVY6 613 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 KRT77Q7Z794 578 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 SMIM29Q86T20 159 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 TRPT1Q86TN4 253 aaKnown RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 NUDT13Q86X67 352 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 DZIP1Q86YF9 867 aaKnown RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 DCUN1D3Q8IWE4 304 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 MMD2Q8IY49 270 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 MAML2Q8IZL2 1156 aaPredicted RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 OR8H3Q8N146 312 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 CNBD1Q8NA66 436 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 GRHL3Q8TE85 626 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 DEPDC1BQ8WUY9 529 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 PHLDA1Q8WV24 401 aaPredicted RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 FCAMRQ8WWV6 532 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 NSMAFQ92636 917 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 PROX1Q92786 737 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 FAM71F1Q96KD3 344 aaPredicted RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 ADPGKQ9BRR6 497 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 SLC2A11Q9BYW1 496 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 LAT2Q9GZY6 243 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 FAM207AQ9NSI2 230 aaPredicted RBP3.64□□□□□ -1.83
CLK1-213ENST00000492793 ADPRHL2Q9NX46 363 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 ACAD8Q9UKU7 415 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 TNNQ9UQP3 1299 aa3.64□□□□□ -1.83
CLK1-213ENST00000492793 WDR83OSQ9Y284 106 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms