RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CRB2Q5IJ48 1285 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 MLIPQ5VWP3 458 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 KRT77Q7Z794 578 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 PIANPQ8IYJ0 282 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 SYCE1Q8N0S2 351 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 ZADH2Q8N4Q0 377 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 LRRC57Q8N9N7 239 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 OR5AR1Q8NGP9 310 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 FLVCR1-AS1Q8TAF5 88 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 ELMO1Q92556 727 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 RANBP9Q96S59 729 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 NDC1Q9BTX1 674 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 HGH1Q9BTY7 390 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 FRMD8P1Q9BZ68 369 aaPredicted RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 TRIM5Q9C035 493 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 SLC26A1Q9H2B4 701 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 XKR8Q9H6D3 395 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 ZNF552Q9H707 407 aaPredicted RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 WDR54Q9H977 334 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 MRM3Q9HC36 420 aaKnown RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 FAM60AQ9NP50 221 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 TXLNGQ9NUQ3 528 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 INTS7Q9NVH2 962 aaKnown RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 P4HTMQ9NXG6 502 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 SMARCAL1Q9NZC9 954 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 IFT80Q9P2H3 777 aaPredicted RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 NXT1Q9UKK6 140 aaKnown RBP8.8□□□□□ -1
HDAC3-212ENST00000492407 ACAD8Q9UKU7 415 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 MRFAP1Q9Y605 127 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 UNC79Q9P2D8 2635 aa8.8□□□□□ -1
HDAC3-212ENST00000492407 HEATR9A2RTY3 570 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 PABPN1LA6NDY0 278 aaKnown RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 A6NL46 340 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 TARM1B6A8C7 271 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 AGPSO00116 658 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 SEMA7AO75326 666 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 SUN1O94901 812 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 METTL18O95568 372 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 S1PR4O95977 384 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 TPBGLP0DKB5 382 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 PVRP15151 417 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 TPH1P17752 444 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 MMP11P24347 488 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 ADRA1DP25100 572 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 OTX2P32243 289 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 ACVR1Q04771 509 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 AIMP2Q13155 320 aaKnown RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 KLF1Q13351 362 aaPredicted RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 SPARCL1Q14515 664 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 POU6F1Q14863 301 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 ZIC1Q15915 447 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 KYNUQ16719 465 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 PLEKHN1Q494U1 663 aaPredicted RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 SYTL3Q4VX76 610 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 ZC3H12BQ5HYM0 836 aaKnown RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 TCTE1Q5JU00 501 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 AFTPHQ6ULP2 937 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 IGFL2Q6UWQ7 119 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 UNC5DQ6UXZ4 953 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 Q6ZS92 163 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 MAMDC2Q7Z304 686 aaPredicted RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 SLC22A15Q8IZD6 547 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 FAM71DQ8N9W8 422 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 SLC35B2Q8TB61 432 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 NAT14Q8WUY8 206 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 ASZ1Q8WWH4 475 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 GIMAP1Q8WWP7 306 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 ALG3Q92685 438 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 ZUFSPQ96AP4 578 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 SNRNP40Q96DI7 357 aaKnown RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 CARD6Q9BX69 1037 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 RAB11FIP5Q9BXF6 653 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 SPRTNQ9H040 489 aaPredicted RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 AGPAT4Q9NRZ5 378 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 SPHK1Q9NYA1 384 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 EURLQ9NYK6 297 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 AMFRQ9UKV5 643 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 SLC5A6Q9Y289 635 aa8.79□□□□□ -1
HDAC3-212ENST00000492407 PTRH2Q9Y3E5 179 aaKnown RBP8.79□□□□□ -1
HDAC3-212ENST00000492407 A0A1B0GX78 115 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 CCDC78A2IDD5 438 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 FITM1A5D6W6 292 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 ERICH4A6NGS2 130 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 ISM1B1AKI9 464 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 AP3B1O00203 1094 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 CCL22O00626 93 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 KPNA5O15131 536 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 SRPX2O60687 465 aaPredicted RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 GPC4O75487 556 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 LDLRP01130 860 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 APOA4P06727 396 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 ITGAXP20702 1163 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 PKLRP30613 574 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 FOXN2P32314 431 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 FDFT1P37268 417 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 NAA25Q14CX7 972 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 CYP2A13Q16696 494 aa8.78□□□□□ -1
HDAC3-212ENST00000492407 EIF2S3LQ2VIR3 472 aaKnown RBP8.78□□□□□ -1
HDAC3-212ENST00000492407 FAM214AQ32MH5 1076 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms