RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 TRIM16O95361 564 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 TNFAIP8O95379 198 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 PGM3O95394 542 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 EML2O95834 649 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SESN2P58004 480 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CRADDP78560 199 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SHC2P98077 582 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 POU6F1Q14863 301 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 GRTP1Q5TC63 336 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 ARMC3Q5W041 872 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 OGFOD3Q6PK18 319 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CHST15Q7LFX5 561 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 LCA5Q86VQ0 697 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SDR16C5Q8N3Y7 309 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 GPR156Q8NFN8 814 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 IFI44Q8TCB0 444 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 PATE1Q8WXA2 126 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 NMD3Q96D46 503 aaKnown RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CCDC97Q96F63 343 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 OR2M4Q96R27 311 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 TAAR2Q9P1P5 351 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SLC17A6Q9P2U8 582 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 PSAT1Q9Y617 370 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 GOLGA4Q13439 2230 aaKnown RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 WDFY3Q8IZQ1 3526 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CCDC78A2IDD5 438 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CRTAMO95727 393 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 MGAT1P26572 445 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 ARRB2P32121 409 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 HSPA13P48723 471 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CDKN1CP49918 316 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SERPINB8P50452 374 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 NUDT2P50583 147 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 INSM1Q01101 510 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 TLR1Q15399 786 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 NR0B2Q15466 257 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SMAD1Q15797 465 aaKnown RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 TMPRSS7Q7RTY8 843 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 EFL1Q7Z2Z2 1120 aaKnown RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 GALNT13Q8IUC8 556 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 ZNF547Q8IVP9 402 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 ZNF781Q8N8C0 355 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CERS2Q96G23 380 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 DNAJC1Q96KC8 554 aaKnown RBP9.19□□□□□ -0.94
BRCA1-219ENST00000491747 CASS4Q9NQ75 786 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 TCF7L2Q9NQB0 619 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SNX15Q9NRS6 342 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 SLC23A2Q9UGH3 650 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 MID2Q9UJV3 735 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 PADI4Q9UM07 663 aa9.19□□□□□ -0.94
BRCA1-219ENST00000491747 FAM221BA6H8Z2 402 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 MROH6A6NGR9 719 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ERI2A8K979 691 aaKnown RBP9.18□□□□□ -0.94
BRCA1-219ENST00000491747 B4DGG1 531 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 GRID2O43424 1007 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ZBTB14O43829 449 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 SRP72O76094 671 aaKnown RBP9.18□□□□□ -0.94
BRCA1-219ENST00000491747 PRAMEF1O95521 474 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 PRSS56P0CW18 603 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 SMIM18P0DKX4 95 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 SPRP35270 261 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-219ENST00000491747 CDH17Q12864 832 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 TMEM115Q12893 351 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-219ENST00000491747 FLOT2Q14254 428 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 SPANXN3Q5MJ09 141 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ZDHHC20Q5W0Z9 365 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 B3GNT6Q6ZMB0 384 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ATG14Q6ZNE5 492 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 LINC00523Q86TU6 105 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 PHYKPLQ8IUZ5 450 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 NAGSQ8N159 534 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ARL10Q8N8L6 244 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ADCY4Q8NFM4 1077 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 DLG3Q92796 817 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ISL2Q96A47 359 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 MPP4Q96JB8 637 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 CNDP1Q96KN2 507 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 TMEM121BQ9BXQ6 578 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-219ENST00000491747 GSDMCQ9BYG8 508 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 MRPS26Q9BYN8 205 aaKnown RBP9.18□□□□□ -0.94
BRCA1-219ENST00000491747 DPEP2Q9H4A9 486 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 NLE1Q9NVX2 485 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-219ENST00000491747 RPS6KL1Q9Y6S9 549 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 FRYQ5TBA9 3013 aa9.18□□□□□ -0.94
BRCA1-219ENST00000491747 ARHGAP10A1A4S6 786 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 AGAP14A8MT82 685 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 AIM2O14862 343 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 SLC22A2O15244 555 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 TRIM13O60858 407 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 DNAJA2O60884 412 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 OR6B1O95007 311 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 TFAP2AP05549 437 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ACP5P13686 325 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ACTR1BP42025 376 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 MAGEA12P43365 314 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 RANBP1P43487 201 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ARSDP51689 593 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 HK2P52789 917 aa9.17□□□□□ -0.94
BRCA1-219ENST00000491747 MAZP56270 477 aaKnown RBP9.17□□□□□ -0.94
BRCA1-219ENST00000491747 ACTR1AP61163 376 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms