RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 GNPDA1P46926 289 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 KCNC1P48547 511 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 BNIP1Q12981 228 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 DOK6Q6PKX4 331 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 ADAMTSL4Q6UY14 1074 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 RBM44Q6ZP01 1051 aaKnown RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 TRIM74Q86UV6 250 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 NLRP8Q86W28 1048 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 CPNE9Q8IYJ1 553 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 GPBAR1Q8TDU6 330 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 INPP5DQ92835 1189 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 L3HYPDHQ96EM0 354 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 LINGO1Q96FE5 620 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 ATOH8Q96SQ7 321 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 COPS8Q99627 209 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 RIOK2Q9BVS4 552 aaKnown RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 SPATA16Q9BXB7 569 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 DPEP2Q9H4A9 486 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 FAM83DQ9H4H8 585 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 SYNDIG1Q9H7V2 258 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 SPATS2LQ9NUQ6 558 aaKnown RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 SMOXQ9NWM0 555 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 SLC17A4Q9Y2C5 497 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 ENTPD2Q9Y5L3 495 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 PRSS21Q9Y6M0 314 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 ITPR1Q14643 2758 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 IGLV3-16A0A075B6K0 115 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 A0A1W2PNU3 283 aaPredicted RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 SYCE1LA8MT33 242 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 IQCF5A8MTL0 148 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 B4DGG1 531 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 NTN3O00634 580 aaPredicted RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 IMPDH1P20839 514 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 MPSTP25325 297 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 GABREP78334 506 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 CCL7P80098 99 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 ACTN3Q08043 901 aaPredicted RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 ZNF765Q7L2R6 523 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 CLNKQ7Z7G1 428 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 RAVER1Q8IY67 606 aaKnown RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 NRSN1Q8IZ57 195 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 LSMEM2Q8N112 164 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 EEF1AKMT1Q8WVE0 214 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 FGF11Q92914 225 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 EXT2Q93063 718 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 PHF21BQ96EK2 531 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 MOCOSQ96EN8 888 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 PDLIM5Q96HC4 596 aaKnown RBP15.28■□□□□ 0.04
PCCB-218ENST00000490504 ACSS2Q9NR19 701 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 PLEKHM1Q9Y4G2 1056 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 ST14Q9Y5Y6 855 aa15.28■□□□□ 0.04
PCCB-218ENST00000490504 NPEPPSL1A6NEC2 478 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 UBXN8O00124 270 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 BTN3A1O00481 513 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 ZNF195O14628 629 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 AK4P27144 223 aaPredicted RBP15.27■□□□□ 0.03
PCCB-218ENST00000490504 ITPKBP27987 946 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 EIF2S3P41091 472 aaKnown RBP15.27■□□□□ 0.03
PCCB-218ENST00000490504 CCR10P46092 362 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 LSSP48449 732 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 RPL14P50914 215 aaKnown RBP15.27■□□□□ 0.03
PCCB-218ENST00000490504 PDX1P52945 283 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 TSNQ15631 228 aaKnown RBP15.27■□□□□ 0.03
PCCB-218ENST00000490504 TBC1D25Q3MII6 688 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 FRMD7Q6ZUT3 714 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 MAVSQ7Z434 540 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 TRAM1L1Q8N609 369 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 CLDN19Q8N6F1 224 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 Q8N9G6 341 aaPredicted RBP15.27■□□□□ 0.03
PCCB-218ENST00000490504 RILPQ96NA2 401 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 TRMOQ9BU70 441 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 ZSCAN5AQ9BUG6 496 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 POLR1BQ9H9Y6 1135 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 EML4Q9HC35 981 aaKnown RBP15.27■□□□□ 0.03
PCCB-218ENST00000490504 TXLNGQ9NUQ3 528 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 TRNAU1APQ9NX07 287 aaKnown RBP15.27■□□□□ 0.03
PCCB-218ENST00000490504 IKZF3Q9UKT9 509 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 TMCO1Q9UM00 188 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 ANKRD12Q6UB98 2062 aa15.27■□□□□ 0.03
PCCB-218ENST00000490504 A0A1W2PQM1 296 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 PMS2P1A4D2B8 440 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 SUPT3HB4E1H0 165 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 SLCO1B7G3V0H7 640 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 CDC7O00311 574 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 FCHO1O14526 889 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 INPP4BO15327 924 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 SUPT3HO75486 399 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 ATP5HO75947 161 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 SLC25A14O95258 325 aaPredicted RBP15.26■□□□□ 0.03
PCCB-218ENST00000490504 RPLP0P05388 317 aaKnown RBP15.26■□□□□ 0.03
PCCB-218ENST00000490504 MTHFD2P13995 350 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 GFAPP14136 432 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 RGS4P49798 205 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 HERVK_113P63132 956 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 CTBSQ01459 385 aa15.26■□□□□ 0.03
PCCB-218ENST00000490504 GALNT1Q10472 559 aaPredicted RBP15.26■□□□□ 0.03
PCCB-218ENST00000490504 ILF3Q12906 894 aaKnown RBP eCLIP15.26■□□□□ 0.03
PCCB-218ENST00000490504 SPIDRQ14159 915 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms