RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 SERPINH1P50454 418 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF84P51523 738 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TAS2R40P59535 323 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 HILS1P60008 231 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 RHAGQ02094 409 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 GAMTQ14353 236 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 C2orf68Q2NKX9 166 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 EDRF1Q3B7T1 1238 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 CCDC40Q4G0X9 1142 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 CAVIN4Q5BKX8 364 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 SULT1C3Q6IMI6 304 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TMEM88Q6PEY1 159 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 MIER3Q7Z3K6 550 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 ZNF410Q86VK4 478 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 UEVLDQ8IX04 471 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 AQP12AQ8IXF9 295 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 LAS2Q8IYD9 372 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 ZDHHC23Q8IYP9 409 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 HACE1Q8IYU2 909 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 MCUQ8NE86 351 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 OR8K5Q8NH50 307 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 ANKRD49Q8WVL7 239 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 ASB5Q8WWX0 329 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 ARHGAP45Q92619 1136 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TMEM186Q96B77 213 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 BSCL2Q96G97 398 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 KLHL5Q96PQ7 755 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 KCNK16Q96T55 309 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 INPP5KQ9BT40 448 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 RNF26Q9BY78 433 aaPredicted RBP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 SPATC1LQ9H0A9 340 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TXNRD2Q9NNW7 524 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 GLRX2Q9NS18 164 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 ERAP1Q9NZ08 941 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 LARSQ9P2J5 1176 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 TRPC4Q9UBN4 977 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 PCDHA12Q9UN75 941 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 WDR37Q9Y2I8 494 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 AAR2Q9Y312 384 aaKnown RBP3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 JRKLQ9Y4A0 524 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 CEPT1Q9Y6K0 416 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 NOTCH3Q9UM47 2321 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 LRRC7Q96NW7 1537 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 WDR19Q8NEZ3 1342 aa3.1□□□□□ -1.91
DEPDC1-204ENST00000489862 KDM5AP29375 1690 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 PLEKHG1Q9ULL1 1385 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 A0A0G2JK05 382 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 C2orf92A0A1B0GVN3 265 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 YDJCA8MPS7 323 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CASQ2O14958 399 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CTDSPLO15194 276 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 TSC22D2O75157 780 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ACSL3O95573 720 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 SYF2O95926 243 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 GH1P01241 217 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 VIMP08670 466 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CCDC159P0C7I6 412 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 PFKFB1P16118 471 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CYP2A7P20853 494 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 GABRA5P31644 462 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC8A1P32418 973 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 RYKP34925 604 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ADPRHP54922 357 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 DMTNQ08495 405 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CETN1Q12798 172 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 IL24Q13007 206 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 SPP2Q13103 211 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 RIPK1Q13546 671 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 USP41Q3LFD5 358 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ODF3L2Q3SX64 289 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 KRT71Q3SY84 523 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 USH1GQ495M9 461 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 IFI44LQ53G44 452 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 SGO1Q5FBB7 561 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 LDLRAP1Q5SW96 308 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 SFMBT2Q5VUG0 894 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 KRT39Q6A163 491 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 NEK5Q6P3R8 708 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 DHRS13Q6UX07 377 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 HAUS6Q7Z4H7 955 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 GRAMD2AQ8IUY3 354 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 MFN1Q8IWA4 741 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ARL14EPQ8N8R7 260 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 SLC44A5Q8NCS7 719 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 AGBL3Q8NEM8 1001 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 AGR3Q8TD06 166 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 GANCQ8TET4 914 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CTNNBL1Q8WYA6 563 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 AZIN2Q96A70 460 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ARSGQ96EG1 525 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CCDC51Q96ER9 411 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 OTUB1Q96FW1 271 aaPredicted RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 MUS81Q96NY9 551 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ASCL2Q99929 193 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 ZSCAN5AQ9BUG6 496 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 GON7Q9BXV9 100 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 CADM1Q9BY67 442 aaKnown RBP3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 MMP27Q9H306 513 aa3.09□□□□□ -1.91
DEPDC1-204ENST00000489862 TBC1D17Q9HA65 648 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms