RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PTGIRP43119 386 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 GNG11P61952 73 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 NFKB2Q00653 900 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 CTBP1Q13363 440 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 PTK6Q13882 451 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 PAPD7Q5XG87 772 aaKnown RBP24.09■■□□□ 1.45
HMGN1-217ENST00000489072 CNSTQ6PJW8 725 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 SPNS2Q8IVW8 549 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 SLCO2A1Q92959 643 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 CAPZA3Q96KX2 299 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 GPR87Q9BY21 358 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 SLC25A18Q9H1K4 315 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 INTS10Q9NVR2 710 aaKnown RBP24.09■■□□□ 1.45
HMGN1-217ENST00000489072 ASIC3Q9UHC3 531 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 PCYOX1Q9UHG3 505 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 KCNMB2Q9Y691 235 aa24.09■■□□□ 1.45
HMGN1-217ENST00000489072 E7EQ34 232 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 DNALI1O14645 258 aaPredicted RBP24.08■■□□□ 1.45
HMGN1-217ENST00000489072 ZNF749O43361 778 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 RECKO95980 971 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 KLK3P07288 261 aaPredicted RBP24.08■■□□□ 1.45
HMGN1-217ENST00000489072 CHRM3P20309 590 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 MAGP20916 626 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 THOC5Q13769 683 aaKnown RBP24.08■■□□□ 1.45
HMGN1-217ENST00000489072 CREG2Q8IUH2 290 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 DNAJC22Q8N4W6 341 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 SPRTNQ9H040 489 aaPredicted RBP24.08■■□□□ 1.45
HMGN1-217ENST00000489072 FBXO6Q9NRD1 293 aaPredicted RBP24.08■■□□□ 1.45
HMGN1-217ENST00000489072 TUBD1Q9UJT1 453 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 SLC39A10Q9ULF5 831 aa24.08■■□□□ 1.45
HMGN1-217ENST00000489072 FARSAQ9Y285 508 aaKnown RBP24.08■■□□□ 1.45
HMGN1-217ENST00000489072 CCDC88CQ9P219 2028 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 MATN4O95460 622 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 CAPN1P07384 714 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 IVDP26440 423 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 ATP5DP30049 168 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 SLC1A2P43004 574 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 RPS15P62841 145 aaKnown RBP24.07■■□□□ 1.44
HMGN1-217ENST00000489072 LONRF1Q17RB8 773 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 PTCHD3Q3KNS1 767 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 ACSBG2Q5FVE4 666 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 IZUMO3Q5VZ72 239 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 ZNF549Q6P9A3 640 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 FAM198BQ6UWH4 519 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 SYTL1Q8IYJ3 562 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 ZBTB2Q8N680 514 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 DENND1AQ8TEH3 1009 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 RAD51AP1Q96B01 352 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 SLC30A3Q99726 388 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 C20orf96Q9NUD7 363 aaPredicted RBP24.07■■□□□ 1.44
HMGN1-217ENST00000489072 POLHQ9Y253 713 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 VPS9D1Q9Y2B5 631 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 MED16Q9Y2X0 877 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 MED13Q9UHV7 2174 aa24.07■■□□□ 1.44
HMGN1-217ENST00000489072 PCM1Q15154 2024 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 CTAGE9A4FU28 777 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 PRICKLE3O43900 615 aaPredicted RBP24.06■■□□□ 1.44
HMGN1-217ENST00000489072 BANF1O75531 89 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 OR2B3O76000 313 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 CLCN7P51798 805 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 IL10RAQ13651 578 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 ZNF385CQ66K41 422 aaPredicted RBP24.06■■□□□ 1.44
HMGN1-217ENST00000489072 TTC23LQ6PF05 361 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 GPR135Q8IZ08 494 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 GIMAP7Q8NHV1 300 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 N4BP2L2Q92802 583 aaPredicted RBP24.06■■□□□ 1.44
HMGN1-217ENST00000489072 FOPNLQ96NB1 174 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 NAPGQ99747 312 aaPredicted RBP24.06■■□□□ 1.44
HMGN1-217ENST00000489072 FAM169AQ9Y6X4 670 aa24.06■■□□□ 1.44
HMGN1-217ENST00000489072 E5RI56 91 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 FANCGO15287 622 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 CCNFP41002 786 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 UGT8Q16880 541 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 MSS51Q4VC12 460 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 FAM69BQ5VUD6 431 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 SYVN1Q86TM6 617 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 KLHL7Q8IXQ5 586 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 ENDOVQ8N8Q3 282 aaKnown RBP24.05■■□□□ 1.44
HMGN1-217ENST00000489072 SLC22A18Q96BI1 424 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 RAB11FIP5Q9BXF6 653 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 FAM117AQ9C073 453 aa24.05■■□□□ 1.44
HMGN1-217ENST00000489072 RAB40ALP0C0E4 278 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 MPP1Q00013 466 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 DHX9Q08211 1270 aaKnown RBP24.04■■□□□ 1.44
HMGN1-217ENST00000489072 KLHL38Q2WGJ6 581 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 EEF1AKMT2Q5JPI9 291 aaKnown RBP24.04■■□□□ 1.44
HMGN1-217ENST00000489072 FCRL6Q6DN72 434 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.04■■□□□ 1.44
HMGN1-217ENST00000489072 HMGCLL1Q8TB92 370 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 ABHD17AQ96GS6 310 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 NLNQ9BYT8 704 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 SLC7A5P2Q9GIP4 190 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 FBXO5Q9UKT4 447 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 PLCL2Q9UPR0 1127 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 MRFAP1Q9Y605 127 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 SAR1BQ9Y6B6 198 aa24.04■■□□□ 1.44
HMGN1-217ENST00000489072 ARHGEF33A8MVX0 844 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 SLC28A2O43868 658 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 HBQ1P09105 142 aa24.03■■□□□ 1.44
HMGN1-217ENST00000489072 CBSLP0DN79 551 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms