RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CYP2A13Q16696 494 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 IGFL3Q6UXB1 125 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 KIAA1328Q86T90 577 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 FAM20CQ8IXL6 584 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 SLC22A15Q8IZD6 547 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 SYCE1Q8N0S2 351 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 PRR7Q8TB68 274 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 DLG3Q92796 817 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 HDAC10Q969S8 669 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 PTERQ96BW5 349 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 MRFAP1L1Q96HT8 127 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 TTC1Q99614 292 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 ILKAPQ9H0C8 392 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-231ENST00000488905 ZNF552Q9H707 407 aaPredicted RBP17.72■□□□□ 0.43
HDAC6-231ENST00000488905 EURLQ9NYK6 297 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 SLC2A6Q9UGQ3 507 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 RIMKLBQ9ULI2 386 aa17.72■□□□□ 0.43
HDAC6-231ENST00000488905 ZGRF1Q86YA3 2104 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 MASP2O00187 686 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 IPO13O94829 963 aaKnown RBP17.71■□□□□ 0.43
HDAC6-231ENST00000488905 GAS8O95995 478 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 CCR7P32248 378 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 TSTD2Q5T7W7 516 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 VRK3Q8IV63 474 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 TMEM151BQ8IW70 566 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 DCUN1D3Q8IWE4 304 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 LINC01555Q8NAE3 123 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 LKAAEAR1Q8TD35 194 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 ATG4AQ8WYN0 398 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 TM9SF4Q92544 642 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 FKBP10Q96AY3 582 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 RANBP9Q96S59 729 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 MENTQ9BUN1 341 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 TSSK1BQ9BXA7 367 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 ASF1BQ9NVP2 202 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 KLHL20Q9Y2M5 609 aa17.71■□□□□ 0.43
HDAC6-231ENST00000488905 A0A1B0GX78 115 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 AGPSO00116 658 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 SUN1O94901 812 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 RPN2P04844 631 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 ITGAXP20702 1163 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 SOX8P57073 446 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 ACVR1Q04771 509 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 HSPA14Q0VDF9 509 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 PPP1R21Q6ZMI0 780 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 ZNF534Q76KX8 674 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 CISD2Q8N5K1 135 aaKnown RBP17.7■□□□□ 0.42
HDAC6-231ENST00000488905 OR4L1Q8NH43 312 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 INPP5DQ92835 1189 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 SLC22A18Q96BI1 424 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 ZNF778Q96MU6 729 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 ETNK1Q9HBU6 452 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 SLC22A11Q9NSA0 550 aa17.7■□□□□ 0.42
HDAC6-231ENST00000488905 ERRFI1Q9UJM3 462 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-231ENST00000488905 HEATR5BQ9P2D3 2071 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 GPC4O75487 556 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 CBX6O95503 412 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 S1PR4O95977 384 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 FDFT1P37268 417 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 ARSFP54793 590 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 GRB7Q14451 532 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 SEMA3AQ14563 771 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 OASLQ15646 514 aaKnown RBP17.69■□□□□ 0.42
HDAC6-231ENST00000488905 UNC5DQ6UXZ4 953 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 TTLL10Q6ZVT0 673 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 TAX1BP1Q86VP1 789 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 OR6P1Q8NGX9 317 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 ASZ1Q8WWH4 475 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 NACC2Q96BF6 587 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 HES6Q96HZ4 224 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 IL17FQ96PD4 163 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 ATP13A2Q9NQ11 1180 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 CIDEBQ9UHD4 219 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 FBXL4Q9UKA2 621 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 TCAF1Q9Y4C2 921 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 CREBBPQ92793 2442 aa17.69■□□□□ 0.42
HDAC6-231ENST00000488905 LRBAP50851 2863 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 E7EVH7 732 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 LDLRP01130 860 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 IFNB1P01574 187 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 APOA4P06727 396 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 CD9P21926 228 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 ALAS2P22557 587 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 MMP11P24347 488 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 ADRA1DP25100 572 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 STIP1P31948 543 aaKnown RBP17.68■□□□□ 0.42
HDAC6-231ENST00000488905 GRIA1P42261 906 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 PRAMEP78395 509 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 KIF5AQ12840 1032 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 AIMP2Q13155 320 aaKnown RBP17.68■□□□□ 0.42
HDAC6-231ENST00000488905 FASTKD1Q53R41 847 aaKnown RBP17.68■□□□□ 0.42
HDAC6-231ENST00000488905 AARS2Q5JTZ9 985 aaKnown RBP17.68■□□□□ 0.42
HDAC6-231ENST00000488905 Q6ZS92 163 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 MCATQ8IVS2 390 aaKnown RBP17.68■□□□□ 0.42
HDAC6-231ENST00000488905 ZADH2Q8N4Q0 377 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 C2orf73Q8N5S3 287 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-231ENST00000488905 LMNTD1Q8N9Z9 388 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 OR2L8Q8NGY9 312 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 CFAP61Q8NHU2 1237 aa17.68■□□□□ 0.42
HDAC6-231ENST00000488905 DENND1AQ8TEH3 1009 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms