RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 PERM1Q5SV97 790 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 AMIGO1Q86WK6 493 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 PTGR2Q8N8N7 351 aaPredicted RBP11.95□□□□□ -0.5
TRAIP-209ENST00000488860 PDPRQ8NCN5 879 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 IFI44Q8TCB0 444 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 DENND1AQ8TEH3 1009 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 FBXL8Q96CD0 374 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 PHF21BQ96EK2 531 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 AHCYL2Q96HN2 611 aaKnown RBP11.95□□□□□ -0.5
TRAIP-209ENST00000488860 PAIP2Q9BPZ3 127 aaKnown RBP11.95□□□□□ -0.5
TRAIP-209ENST00000488860 ATG10Q9H0Y0 220 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 SRMSQ9H3Y6 488 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 KCNK4Q9NYG8 393 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 NKIRAS1Q9NYS0 192 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 LNPEPQ9UIQ6 1025 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 U3KQA8 63 aa11.95□□□□□ -0.5
TRAIP-209ENST00000488860 CCDC189A1A4V9 331 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 GSAPA4D1B5 854 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 OR6C74A6NCV1 312 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ZNF839A8K0R7 811 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 A8MT66 165 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 TM9SF1O15321 606 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 SBK3P0C264 359 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 CKMT1AP12532 417 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 AMD1P17707 334 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 NR1D1P20393 614 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 HSPA7P48741 367 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 PNLIPRP1P54315 467 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 OR1D5P58170 312 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 TBPL1P62380 186 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 PPP2R2AP63151 447 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 CDKL1Q00532 357 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 FASTKQ14296 549 aaKnown RBP11.94□□□□□ -0.5
TRAIP-209ENST00000488860 AMZ1Q400G9 498 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 CCDC157Q569K6 752 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 THEMIS2Q5TEJ8 643 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 HHATQ5VTY9 493 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ANKS6Q68DC2 871 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 SULT1C3Q6IMI6 304 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 AGTRAPQ6RW13 159 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 SUSD1Q6UWL2 747 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ZYG11AQ6WRX3 759 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 DBX2Q6ZNG2 339 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 RAB44Q7Z6P3 723 aaPredicted RBP11.94□□□□□ -0.5
TRAIP-209ENST00000488860 OOSP2Q86WS3 158 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 TCAIMQ8N3R3 496 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 OR6C4Q8NGE1 309 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 RDH11Q8TC12 318 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ZNF480Q8WV37 535 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ZFPM2Q8WW38 1151 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ATL1Q8WXF7 558 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 RSC1A1Q92681 617 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 NAT6Q93015 286 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ESAMQ96AP7 390 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 RHBDF1Q96CC6 855 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 CCDC3Q9BQI4 270 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 TMEM79Q9BSE2 394 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 MECRQ9BV79 373 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 TMCO1Q9UM00 188 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ADAMTS20P59510 1910 aa11.94□□□□□ -0.5
TRAIP-209ENST00000488860 ASXL3Q9C0F0 2248 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 WDR91A4D1P6 747 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 EME2A4GXA9 379 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-209ENST00000488860 ISM1B1AKI9 464 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 DUX1O43812 170 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 CCNT2O60583 730 aaKnown RBP11.93□□□□□ -0.5
TRAIP-209ENST00000488860 UBXN7O94888 489 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 WDR47O94967 919 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 PROS1P07225 676 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 MTHFD2P13995 350 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 CPA3P15088 417 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 CKMT2P17540 419 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 POLR2CP19387 275 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-209ENST00000488860 KCNA4P22459 653 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 ATP5F1P24539 256 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-209ENST00000488860 PSMB5P28074 263 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 EEF1DP29692 281 aaKnown RBP11.93□□□□□ -0.5
TRAIP-209ENST00000488860 AGTR2P50052 363 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 HNMTP50135 292 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 ALDH18A1P54886 795 aaKnown RBP11.93□□□□□ -0.5
TRAIP-209ENST00000488860 PRKAA1Q13131 559 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 NAE1Q13564 534 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 PCLAFQ15004 111 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 SETDB1Q15047 1291 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 NKAIN2Q5VXU1 208 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 ARMC6Q6NXE6 501 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 ZNF438Q7Z4V0 828 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 SPRED1Q7Z699 444 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 TMEM151AQ8N4L1 468 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 LINC01555Q8NAE3 123 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 OR2L8Q8NGY9 312 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 PYCR2Q96C36 320 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 MENTQ9BUN1 341 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 UCK1Q9HA47 277 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 CCDC177Q9NQR7 707 aaPredicted RBP11.93□□□□□ -0.5
TRAIP-209ENST00000488860 COPG2Q9UBF2 871 aa11.93□□□□□ -0.5
TRAIP-209ENST00000488860 UNC13CQ8NB66 2214 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 EP300Q09472 2414 aaPredicted RBP11.92□□□□□ -0.5
TRAIP-209ENST00000488860 HEATR5BQ9P2D3 2071 aa11.92□□□□□ -0.5
TRAIP-209ENST00000488860 PIPSLA2A3N6 862 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms