RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 MAGP20916 626 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 PTPN4P29074 926 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 ATP5DP30049 168 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 RPS15P62841 145 aaKnown RBP17.11■□□□□ 0.33
ITGB1-215ENST00000488494 NFKB2Q00653 900 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 IL10RAQ13651 578 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 GBX1Q14549 363 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 LONRF1Q17RB8 773 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 PTCHD3Q3KNS1 767 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 CCSMST1Q4G0I0 132 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 LCN10Q6JVE6 187 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 TTC23LQ6PF05 361 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 FAM198BQ6UWH4 519 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 ZNF517Q6ZMY9 492 aaPredicted RBP17.11■□□□□ 0.33
ITGB1-215ENST00000488494 SYTL1Q8IYJ3 562 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 GPR135Q8IZ08 494 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 FOPNLQ96NB1 174 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 GPR87Q9BY21 358 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 FAM117AQ9C073 453 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 SLC7A5P2Q9GIP4 190 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 SLC25A18Q9H1K4 315 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 FBXO6Q9NRD1 293 aaPredicted RBP17.11■□□□□ 0.33
ITGB1-215ENST00000488494 C20orf96Q9NUD7 363 aaPredicted RBP17.11■□□□□ 0.33
ITGB1-215ENST00000488494 POLHQ9Y253 713 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 KLHL20Q9Y2M5 609 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 HEMK1Q9Y5R4 338 aaPredicted RBP17.11■□□□□ 0.33
ITGB1-215ENST00000488494 SPTA1P02549 2419 aa17.11■□□□□ 0.33
ITGB1-215ENST00000488494 DNALI1O14645 258 aaPredicted RBP17.1■□□□□ 0.33
ITGB1-215ENST00000488494 ZNF749O43361 778 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 SLC28A2O43868 658 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 BANF1O75531 89 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 OR2B3O76000 313 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 S1PR4O95977 384 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 PKMP14618 531 aaKnown RBP17.1■□□□□ 0.33
ITGB1-215ENST00000488494 CCNFP41002 786 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 GABRA4P48169 554 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 CTBP1Q13363 440 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 IZUMO3Q5VZ72 239 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 ENDOVQ8N8Q3 282 aaKnown RBP17.1■□□□□ 0.33
ITGB1-215ENST00000488494 SLCO2A1Q92959 643 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 SLC22A18Q96BI1 424 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 SIGLEC10Q96LC7 697 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 NAPGQ99747 312 aaPredicted RBP17.1■□□□□ 0.33
ITGB1-215ENST00000488494 CHRNA10Q9GZZ6 450 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 IRAK4Q9NWZ3 460 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 GALPQ9UBC7 116 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 PCYOX1Q9UHG3 505 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 TUBD1Q9UJT1 453 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 MRFAP1Q9Y605 127 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 KCNMB2Q9Y691 235 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 BSNQ9UPA5 3926 aa17.1■□□□□ 0.33
ITGB1-215ENST00000488494 ZSCAN9O15535 394 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-215ENST00000488494 CTSBP07858 339 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 PGAM1P18669 254 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 PSMB5P28074 263 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 PTGIRP43119 386 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 MPP1Q00013 466 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 CRYMQ14894 314 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 UGT8Q16880 541 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 ACSBG2Q5FVE4 666 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 PAPD7Q5XG87 772 aaKnown RBP17.09■□□□□ 0.33
ITGB1-215ENST00000488494 SYVN1Q86TM6 617 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 KLHL7Q8IXQ5 586 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 RAB42Q8N4Z0 105 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.09■□□□□ 0.33
ITGB1-215ENST00000488494 GIMAP7Q8NHV1 300 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 C9orf43Q8TAL5 461 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-215ENST00000488494 DENND1AQ8TEH3 1009 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 RAD51AP1Q96B01 352 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 FAM167BQ9BTA0 163 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 CCDC68Q9H2F9 335 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-215ENST00000488494 MAN2B2Q9Y2E5 1009 aa17.09■□□□□ 0.33
ITGB1-215ENST00000488494 ARHGEF33A8MVX0 844 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 H3BMH7 237 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 MATN4O95460 622 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 HBQ1P09105 142 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 CLCN7P51798 805 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 DR1Q01658 176 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 CUL1Q13616 776 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.08■□□□□ 0.32
ITGB1-215ENST00000488494 FAM69BQ5VUD6 431 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 ZNF549Q6P9A3 640 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 CREG2Q8IUH2 290 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 SPNS2Q8IVW8 549 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 DNAJC22Q8N4W6 341 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 CALML6Q8TD86 181 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 SEC14L1Q92503 715 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 SLC30A3Q99726 388 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 SPRTNQ9H040 489 aaPredicted RBP17.08■□□□□ 0.32
ITGB1-215ENST00000488494 FBXO5Q9UKT4 447 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 PLCL2Q9UPR0 1127 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 FARSAQ9Y285 508 aaKnown RBP17.08■□□□□ 0.32
ITGB1-215ENST00000488494 SAR1BQ9Y6B6 198 aa17.08■□□□□ 0.32
ITGB1-215ENST00000488494 C9J4A7 227 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 SNRNP200O75643 2136 aaKnown RBP17.07■□□□□ 0.32
ITGB1-215ENST00000488494 RECKO95980 971 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 RAB40ALP0C0E4 278 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 ATXN8OSP0DMR3 200 aa17.07■□□□□ 0.32
ITGB1-215ENST00000488494 PMS2P54278 862 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms