RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 GOLPH3LQ9H4A5 285 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 TBC1D17Q9HA65 648 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CRNNQ9UBG3 495 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 OSGIN1Q9UJX0 560 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 RRP15Q9Y3B9 282 aaKnown RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 GRIP1Q9Y3R0 1128 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CCL27Q9Y4X3 112 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 NME7Q9Y5B8 376 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 ASTN2O75129 1339 aaPredicted RBP3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 CCDC171Q6TFL3 1326 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 KDRP35968 1356 aa3.62□□□□□ -1.83
ECHDC1-217ENST00000488087 PRDM15P57071 1507 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 UGGT2Q9NYU1 1516 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 FAM135AQ9P2D6 1515 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 A0A087WUV0 522 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 BICDL2A1A5D9 508 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ANKUB1A6NFN9 424 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ERICH4A6NGS2 130 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 HEPACAM2A8MVW5 462 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 TBX10O75333 385 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ADCY5O95622 1261 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 FYNP06241 537 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 UMODP07911 640 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 CCDC175P0C221 793 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 PFKFB1P16118 471 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 NR1D1P20393 614 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 MSH3P20585 1137 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 CPT2P23786 658 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 OAS2P29728 719 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 NR2C2P49116 596 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF75DP51815 510 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 THOP1P52888 689 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 KRT83P78385 493 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 DMP1Q13316 513 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 IL11RAQ14626 422 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 LETM2Q2VYF4 491 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 C1orf141Q5JVX7 400 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ARMC4Q5T2S8 1044 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 C6orf163Q5TEZ5 329 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 CAMKMTQ7Z624 323 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ERC1Q8IUD2 1116 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 PPFIBP2Q8ND30 876 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 CFAP61Q8NHU2 1237 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ATL1Q8WXF7 558 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 RSPH1Q8WYR4 309 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 DNASE2BQ8WZ79 361 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 HDAC11Q96DB2 347 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 SPACA9Q96E40 222 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 KRTAP1-5Q9BYS1 174 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ZSCAN16Q9H4T2 348 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 BICC1Q9H694 974 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 OPA3Q9H6K4 179 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ANKZF1Q9H8Y5 726 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 ZBTB20Q9HC78 741 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 PFDN4Q9NQP4 134 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 OSER1Q9NX31 292 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 CWC25Q9NXE8 425 aaPredicted RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 CLTCL1P53675 1640 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 RTL1A6NKG5 1358 aa3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 SUPT6HQ7KZ85 1726 aaKnown RBP3.61□□□□□ -1.83
ECHDC1-217ENST00000488087 PLA2R1Q13018 1463 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 A0A0B4J293 547 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 EDDM13A0A1B0GTR0 161 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 SYCE3A1L190 88 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 HYKKA2RU49 373 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 H0YHG0 523 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 MEIS2O14770 477 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 PRKNO60260 465 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 TBCAO75347 108 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 MED24O75448 989 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 SMC2O95347 1197 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 SLU7O95391 586 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 TRUB2O95900 331 aaKnown RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 QDPRP09417 244 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 LINGO3P0C6S8 592 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 SP100P23497 879 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 CHMLP26374 656 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 MAGEA8P43361 318 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 CD151P48509 253 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 RAB28P51157 221 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 CDH11P55287 796 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 TPD52P55327 224 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 ZNF628Q5EBL2 1059 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 SLC27A1Q6PCB7 646 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 TMPRSS11FQ6ZWK6 438 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 ANO5Q75V66 913 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 PLPPR4Q7Z2D5 763 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 IQCHQ86VS3 1027 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 C10orf67Q8IYJ2 551 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 CFAP206Q8IYR0 622 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 MAML2Q8IZL2 1156 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 OR2T12Q8NG77 320 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 MOSPD2Q8NHP6 518 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 TEKT4Q8WW24 435 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 TM9SF4Q92544 642 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 NXNL1Q96CM4 212 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 SPATA17Q96L03 361 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 RAB3IPQ96QF0 476 aaPredicted RBP3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 OLFM1Q99784 485 aa3.6□□□□□ -1.83
ECHDC1-217ENST00000488087 EDEM3Q9BZQ6 932 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms