RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 KCNK15Q9H427 330 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 NDE1Q9NXR1 346 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 GPR83Q9NYM4 423 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 B3GAT1Q9P2W7 334 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 DAPK2Q9UIK4 370 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 NME7Q9Y5B8 376 aa3.22□□□□□ -1.89
CCDC66-221ENST00000487739 ZNF644Q9H582 1327 aaPredicted RBP3.21□□□□□ -1.89
CCDC66-221ENST00000487739 MYH15Q9Y2K3 1946 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 ASB14A6NK59 587 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 PRAMEF11O60813 436 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 MED24O75448 989 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 CDK2AP2O75956 126 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 CDH3P22223 829 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 MAN1A1P33908 653 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 TSFMP43897 325 aaKnown RBP3.21□□□□□ -1.9
CCDC66-221ENST00000487739 TPD52P55327 224 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-221ENST00000487739 SIRPAP78324 504 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 SETQ01105 290 aaPredicted RBP3.21□□□□□ -1.9
CCDC66-221ENST00000487739 CXCL9Q07325 125 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 FIGLAQ6QHK4 219 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 KIF6Q6ZMV9 814 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 TMPRSS11FQ6ZWK6 438 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 HPS6Q86YV9 775 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 CEP57L1Q8IYX8 460 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 ADGRF2Q8IZF7 708 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 LRRC15Q8TF66 581 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 GATAD1Q8WUU5 269 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 SLC45A3Q96JT2 553 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 NECTIN4Q96NY8 510 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 AGAP4Q96P64 663 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 MIS12Q9H081 205 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 SPATC1LQ9H0A9 340 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 KRT84Q9NSB2 600 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 OLA1Q9NTK5 396 aaKnown RBP3.21□□□□□ -1.9
CCDC66-221ENST00000487739 AASSQ9UDR5 926 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 TNNQ9UQP3 1299 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 CSNK1G3Q9Y6M4 447 aa3.21□□□□□ -1.9
CCDC66-221ENST00000487739 A0A1W2PR80 420 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 SLC2A2P11168 524 aaPredicted RBP3.2□□□□□ -1.9
CCDC66-221ENST00000487739 TM4SF1P30408 202 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 HLA-FP30511 346 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 KRT32Q14532 448 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 ODF4Q2M2E3 257 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 XKR3Q5GH77 459 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 LCN1P1Q5VSP4 162 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 HAUS3Q68CZ6 603 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 G2E3Q7L622 706 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 LDB1Q86U70 411 aaPredicted RBP3.2□□□□□ -1.9
CCDC66-221ENST00000487739 AFAP1Q8N556 730 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 AQP11Q8NBQ7 271 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 OR11H4Q8NGC9 324 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 OR1L3Q8NH93 324 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 RAD9AQ99638 391 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 SHARPINQ9H0F6 387 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 FAM49AQ9H0Q0 323 aaPredicted RBP3.2□□□□□ -1.9
CCDC66-221ENST00000487739 THAP2Q9H0W7 228 aa3.2□□□□□ -1.9
CCDC66-221ENST00000487739 ACOD1A6NK06 481 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 OR10H2O60403 315 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 TSPAN1O60635 241 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 IGHEP01854 428 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 HSPA8P11142 646 aaKnown RBP3.19□□□□□ -1.9
CCDC66-221ENST00000487739 PIK3R1P27986 724 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 GABRA5P31644 462 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 ACSL1P33121 698 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 MNDAP41218 407 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 MFAP4P55083 255 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 AIMP2Q13155 320 aaKnown RBP3.19□□□□□ -1.9
CCDC66-221ENST00000487739 HERC3Q15034 1050 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 ALFQ53S48 1182 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 SPDYCQ5MJ68 293 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 JAKMIP3Q5VZ66 844 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 FRRS1Q6ZNA5 592 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 SLC47A2Q86VL8 602 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 C1orf131Q8NDD1 294 aaKnown RBP3.19□□□□□ -1.9
CCDC66-221ENST00000487739 NKX3-1Q99801 234 aaPredicted RBP3.19□□□□□ -1.9
CCDC66-221ENST00000487739 POLR3GLQ9BT43 218 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 FTOQ9C0B1 505 aaKnown RBP eCLIP3.19□□□□□ -1.9
CCDC66-221ENST00000487739 SERINC1Q9NRX5 453 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 FAM207AQ9NSI2 230 aaPredicted RBP3.19□□□□□ -1.9
CCDC66-221ENST00000487739 STUB1Q9UNE7 303 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 ZNF148Q9UQR1 794 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 NOTCH2Q04721 2471 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 ZNF541Q9H0D2 1346 aa3.19□□□□□ -1.9
CCDC66-221ENST00000487739 C2orf81A6NN90 581 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 ENO4A6NNW6 628 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 THEGLP0DJG4 465 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 GARSP41250 739 aaKnown RBP3.18□□□□□ -1.9
CCDC66-221ENST00000487739 SLC9A3P48764 834 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 MPP1Q00013 466 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 EFTUD2Q15029 972 aaKnown RBP eCLIP3.18□□□□□ -1.9
CCDC66-221ENST00000487739 C15orf32Q32M92 178 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 SEL1L3Q68CR1 1132 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 DHRS7BQ6IAN0 325 aaPredicted RBP3.18□□□□□ -1.9
CCDC66-221ENST00000487739 NOTUMQ6P988 496 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 NUDT13Q86X67 352 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 CATSPERDQ86XM0 798 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 CERS3Q8IU89 383 aa3.18□□□□□ -1.9
CCDC66-221ENST00000487739 METTL4Q8N3J2 472 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms