RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 HSD17B3P37058 310 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 LHX1P48742 406 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 CAPZA1P52907 286 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 MAPK12P53778 367 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 HERV-K104P61576 105 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 RBBP5Q15291 538 aaKnown RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 TWISTNBQ3B726 338 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 TECRLQ5HYJ1 363 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 SPOUT1Q5T280 376 aaKnown RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 CEACAM20Q6UY09 585 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 SPATA21Q7Z572 469 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 ARHGAP22Q7Z5H3 698 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 DZIP1Q86YF9 867 aaKnown RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 C4orf19Q8IY42 314 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 CEP57L1Q8IYX8 460 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 ARHGAP24Q8N264 748 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 NIPA2Q8N8Q9 360 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 IRGQQ8WZA9 623 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 FAM162AQ96A26 154 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 SLC47A1Q96FL8 570 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 FNBP1Q96RU3 617 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 CITED2Q99967 270 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 PSD2Q9BQI7 771 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 FAM49AQ9H0Q0 323 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 PPANQ9NQ55 473 aaKnown RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 FGF21Q9NSA1 209 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 ZFP57Q9NU63 452 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 ADPRHL2Q9NX46 363 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 C5AR2Q9P296 337 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 B3GAT1Q9P2W7 334 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 C19orf25Q9UFG5 118 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 GIMAP2Q9UG22 337 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 ACAD8Q9UKU7 415 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 SNX7Q9UNH6 387 aa3.47□□□□□ -1.85
HMGB1P36-201ENST00000487709 A0A1W2PPQ1 181 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 A0A1W2PRQ8 180 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 FAM170AA1A519 330 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 C5orf60A6NFR6 353 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 DUXAA6NLW8 204 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 ANXA2P2A6NMY6 339 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 PLOD2O00469 737 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 CIDEAO60543 219 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 RPS6KA5O75582 802 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 SLCO2B1O94956 709 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 MOCS3O95396 460 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 WDPCPO95876 746 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 IGHV2-70P01814 119 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 HAPLN1P10915 354 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 EFNA1P20827 205 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 CA6P23280 308 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 GP5P40197 560 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 BMXP51813 675 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 POU5F1Q01860 360 aaKnown RBP3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 LGALS3BPQ08380 585 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 ACSM1Q08AH1 577 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 DMPKQ09013 629 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 ARL16Q0P5N6 197 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 RBM39Q14498 530 aaKnown RBP3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 MCMDC2Q4G0Z9 681 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 SYT14P1Q58G82 188 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 LRRC73Q5JTD7 316 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 KRT77Q7Z794 578 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 TIGD4Q8IY51 512 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 NOA1Q8NC60 698 aaKnown RBP3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 NPEPL1Q8NDH3 523 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 OR10V1Q8NGI7 309 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 SLC26A7Q8TE54 656 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 DEPDC1BQ8WUY9 529 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 HSD17B8Q92506 261 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 SUSD6Q92537 303 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 TAF15Q92804 592 aaKnown RBP eCLIP3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 EXT2Q93063 718 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 LRRC3BQ96PB8 259 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 CPNE1Q99829 537 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 MGME1Q9BQP7 344 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 INTS10Q9NVR2 710 aaKnown RBP3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 RASAL2Q9UJF2 1139 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 TRIM17Q9Y577 477 aa3.46□□□□□ -1.86
HMGB1P36-201ENST00000487709 HTR3EA5X5Y0 456 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 TMEM221A6NGB7 291 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 BLOC1S5-TXNDC5H3BN57 136 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 ARPC2O15144 300 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 ATP6V0E1O15342 81 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 OR10H2O60403 315 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 TOMM70O94826 608 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 RPN1P04843 607 aaKnown RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 OR52Z1P0C646 297 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 HSPA8P11142 646 aaKnown RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 CDH3P22223 829 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 ACAT1P24752 427 aaKnown RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 ITGA3P26006 1051 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 CDC25CP30307 473 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 RPL21P46778 160 aaKnown RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 MZT1Q08AG7 82 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 ILF3Q12906 894 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 BFSP1Q12934 665 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 RRS1Q15050 365 aaKnown RBP3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 KLHL26Q53HC5 615 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 WDR38Q5JTN6 314 aa3.45□□□□□ -1.86
HMGB1P36-201ENST00000487709 LCE3CQ5T5A8 94 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms