RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 USP39Q53GS9 565 aaKnown RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 PLEKHS1Q5SXH7 462 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 OTUD3Q5T2D3 398 aaPredicted RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 GDPD4Q6W3E5 623 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 TMEM25Q86YD3 366 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 ZDHHC13Q8IUH4 622 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 FAM9CQ8IZT9 166 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 SDCCAG3Q96C92 435 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 SMG9Q9H0W8 520 aaKnown RBP25.47■■□□□ 1.67
HLA-C-208ENST00000487245 C1orf109Q9NX04 203 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 SLC25A37Q9NYZ2 338 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 ADGRE2Q9UHX3 823 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 MAN2B2Q9Y2E5 1009 aa25.47■■□□□ 1.67
HLA-C-208ENST00000487245 CCL16O15467 120 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 ERN1O75460 977 aaKnown RBP25.46■■□□□ 1.67
HLA-C-208ENST00000487245 HIST1H2AGP0C0S8 130 aaPredicted RBP25.46■■□□□ 1.67
HLA-C-208ENST00000487245 CYP2A6P11509 494 aaPredicted RBP25.46■■□□□ 1.67
HLA-C-208ENST00000487245 TCF3P15923 654 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 HIST1H2ADP20671 130 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 HNMTP50135 292 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 SP140Q13342 867 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 TUBA3CQ13748 450 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 PLCL1Q15111 1095 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 ARHGAP15Q53QZ3 475 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 SPANXN4Q5MJ08 99 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 LRIF1Q5T3J3 769 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 BRAT1Q6PJG6 821 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 UBE2R2Q712K3 238 aaPredicted RBP25.46■■□□□ 1.67
HLA-C-208ENST00000487245 RTL10Q7L3V2 364 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 THAP5Q7Z6K1 395 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 STK32CQ86UX6 486 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 CALHM3Q86XJ0 350 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 MICU2Q8IYU8 434 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 RGL4Q8IZJ4 473 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 FIG4Q92562 907 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 HIST1H2AHQ96KK5 128 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 HIST1H2AJQ99878 128 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 H2AFJQ9BTM1 129 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 OSBPL10Q9BXB5 764 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 B4GALT6Q9UBX8 382 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 PDE10AQ9Y233 779 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 PLXNB3Q9ULL4 1909 aa25.46■■□□□ 1.67
HLA-C-208ENST00000487245 SOBPA7XYQ1 873 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 G3V2T6 193 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 CXCR6O00574 342 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 NRG2O14511 850 aaPredicted RBP25.45■■□□□ 1.67
HLA-C-208ENST00000487245 SEC22BO75396 215 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 SHMT2P34897 504 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 RECQLP46063 649 aaPredicted RBP25.45■■□□□ 1.67
HLA-C-208ENST00000487245 SEMG2Q02383 582 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 NKG7Q16617 165 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 GGTA1PQ4G0N0 100 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 ASTLQ6HA08 431 aaPredicted RBP25.45■■□□□ 1.67
HLA-C-208ENST00000487245 GPR149Q86SP6 731 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 CLEC4FQ8N1N0 589 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 OR13F1Q8NGS4 319 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 OR10A6Q8NH74 314 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 HDAC2Q92769 488 aaKnown RBP25.45■■□□□ 1.67
HLA-C-208ENST00000487245 SLC47A1Q96FL8 570 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 MAGEB10Q96LZ2 347 aaPredicted RBP25.45■■□□□ 1.67
HLA-C-208ENST00000487245 THUMPD3Q9BV44 507 aaKnown RBP25.45■■□□□ 1.67
HLA-C-208ENST00000487245 ACTR8Q9H981 624 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 PREBQ9HCU5 417 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 HPS4Q9NQG7 708 aa25.45■■□□□ 1.67
HLA-C-208ENST00000487245 FARSBQ9NSD9 589 aaKnown RBP25.45■■□□□ 1.67
HLA-C-208ENST00000487245 PIKFYVEQ9Y2I7 2098 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 ATE1O95260 518 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 ATP1B2P14415 290 aaPredicted RBP25.45■■□□□ 1.66
HLA-C-208ENST00000487245 PRPH2P23942 346 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 EPHA5P54756 1037 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 PPP2R2BQ00005 443 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 HMGCS1Q01581 520 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 BROXQ5VW32 411 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 SUSD1Q6UWL2 747 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 ENPP6Q6UWR7 440 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 KLHL23Q8NBE8 558 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 IRF7Q92985 503 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 BBS2Q9BXC9 721 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 KCNH6Q9H252 994 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 IKZF5Q9H5V7 419 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 RAD18Q9NS91 495 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 LIMD1Q9UGP4 676 aa25.45■■□□□ 1.66
HLA-C-208ENST00000487245 A0A096LPI6 279 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 NEDD8-MDP1E9PL57 170 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 NPIPB8E9PQR5 432 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 GPR107Q5VW38 600 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 ELMSAN1Q6PJG2 1045 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 NEK10Q6ZWH5 1172 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 FAM86B1Q8N7N1 296 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 ASB11Q8WXH4 323 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 PAIP1Q9H074 479 aaKnown RBP25.44■■□□□ 1.66
HLA-C-208ENST00000487245 KAT8Q9H7Z6 458 aaKnown RBP25.44■■□□□ 1.66
HLA-C-208ENST00000487245 TBC1D14Q9P2M4 693 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 SLCO3A1Q9UIG8 710 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 SNX6Q9UNH7 406 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 CCL26Q9Y258 94 aa25.44■■□□□ 1.66
HLA-C-208ENST00000487245 CFAP99D6REC4 459 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 BCKDHAP12694 445 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 ITGB8P26012 769 aa25.43■■□□□ 1.66
HLA-C-208ENST00000487245 GZMMP51124 257 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms