RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 A1L4Q6 167 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TARSL2A2RTX5 802 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 FCHO1O14526 889 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 ZSCAN9O15535 394 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PROM1O43490 865 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 SPOPO43791 374 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PEX1O43933 1283 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 RAMP2O60895 175 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 APBB3O95704 486 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 VIPP01282 170 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PROS1P07225 676 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 KRT10P13645 584 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 RBL1P28749 1068 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 RENBPP51606 427 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 CLCN2P51788 898 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 ST8SIA6P61647 398 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TIAL1Q01085 375 aaKnown RBP eCLIP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 SLC20A2Q08357 652 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 FOXO1Q12778 655 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 KRT81Q14533 505 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 CYTH1Q15438 398 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TAZQ16635 292 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TIGD6Q17RP2 521 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 HNRNPA1L2Q32P51 320 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PARP15Q460N3 678 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 ACCSLQ4AC99 568 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 FAM182AQ5T1J6 154 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TEDDM1Q5T9Z0 273 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 NCBP2-AS2Q69YL0 99 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 ANO7Q6IWH7 933 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 C11orf63Q6NUN7 778 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 AADACL2Q6P093 401 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 MAVSQ7Z434 540 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 CAND1Q86VP6 1230 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 WDR5BQ86VZ2 330 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 MAP7D3Q8IWC1 876 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 STK40Q8N2I9 435 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 FSTL5Q8N475 847 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 RNF10Q8N5U6 811 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PLD5Q8N7P1 536 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 DCAF4L2Q8NA75 395 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TSTD1Q8NFU3 115 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 OR2A12Q8NGT7 310 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 OR2T3Q8NH03 318 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 MBD3L2Q8NHZ7 208 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 HMGB4Q8WW32 186 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 RLN3Q8WXF3 142 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 ANP32BQ92688 251 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TBC1D20Q96BZ9 403 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 R3HDM4Q96D70 268 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 TMEM120AQ9BXJ8 343 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 CALN1Q9BXU9 219 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PDFQ9HBH1 243 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 CD93Q9NPY3 652 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 LZTFL1Q9NQ48 299 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 ITM2CQ9NQX7 267 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 KLC4Q9NSK0 619 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 RCOR3Q9P2K3 495 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 DKK3Q9UBP4 350 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 SUN2Q9UH99 717 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 RIMKLBQ9ULI2 386 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PACSIN2Q9UNF0 486 aaPredicted RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 HS3ST2Q9Y278 367 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 DRG1Q9Y295 367 aaKnown RBP6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 PPP2R2CQ9Y2T4 447 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 R4GN57 208 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 FANCMQ8IYD8 2048 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
RTFDC1-209ENST00000487211 CREBBPQ92793 2442 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 CXorf51AA0A1B0GTR3 108 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 LRRD1A4D1F6 860 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 DFFAO00273 331 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 PCDH17O14917 1159 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 MCF2LO15068 1137 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 PSTPIP1O43586 416 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 KRT86O43790 486 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 SYNCRIPO60506 623 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 PRAMEF11O60813 436 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 FTCDO95954 541 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 PTMAP06454 111 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 FESP07332 822 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 CTSLP07711 333 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 ITGA2BP08514 1039 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 CCDC175P0C221 793 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 CTNNA2P26232 953 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 GKP32189 559 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 CTNNA1P35221 906 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 LIPAP38571 399 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 NNMTP40261 264 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 P2RY2P41231 377 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 CDKN2BP42772 138 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 SERPINH1P50454 418 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 METAP1P53582 386 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 ALDH18A1P54886 795 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 TIRAPP58753 221 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 RPS14P62263 151 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 GBE1Q04446 702 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 PAFAH1B3Q15102 231 aaKnown RBP6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 CARD16Q5EG05 197 aa6.19□□□□□ -1.42
RTFDC1-209ENST00000487211 FNDC7Q5VTL7 733 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms