RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 ADPRHP54922 357 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 ERVPABLB-1P60509 514 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 RPS21P63220 83 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 SQLEQ14534 574 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 NUMA1Q14980 2115 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 HERC3Q15034 1050 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 ZRSR2Q15696 482 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 C18orf21Q32NC0 220 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 TMEM198Q66K66 360 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 KIAA0895LQ68EN5 471 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 KIAA1161Q6NSJ0 714 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 TRIM74Q86UV6 250 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 TRAPPC5Q8IUR0 188 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 SLC22A15Q8IZD6 547 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 OR52B6Q8NGF0 335 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 OR2T34Q8NGX1 318 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 UTP4Q969X6 686 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 FOPNLQ96NB1 174 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 LENG8Q96PV6 779 aaPredicted RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 MIPEPQ99797 713 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 RTKNQ9BST9 563 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 CADM1Q9BY67 442 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 RASSF4Q9H2L5 321 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 SLC32A1Q9H598 525 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 ZNF225Q9UK10 706 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 G3BP2Q9UN86 482 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 COPG1Q9Y678 874 aaKnown RBP14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 CEP250Q9BV73 2442 aa14.22□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3DA0A087WVF3 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3IA0A087WXS9 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3EA0A087X179 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3KA0A087X1G2 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 A0A1B0GTW7 788 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3FA6NER0 549 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TMEM202A6NGA9 273 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3LB9A6J9 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 CATP04040 527 aaKnown RBP14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 PCCBP05166 539 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3HP0C7X1 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 ENGP17813 658 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 ATP4BP51164 291 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 ATXN3P54252 364 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 WSCD2Q2TBF2 565 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 ZNF658BQ4V348 819 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3GQ6DHY5 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3CQ6IPX1 549 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 LRRC70Q7Z2Q7 622 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 MILR1Q7Z6M3 343 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 HEATR4Q86WZ0 1026 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TBC1D3Q8IZP1 549 aaPredicted RBP14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 PLA2G15Q8NCC3 412 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 RBM15BQ8NDT2 890 aaKnown RBP14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 OR4F6Q8NGB9 312 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 METTL6Q8TCB7 284 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 C3orf30Q96M34 536 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 NTMT1Q9BV86 223 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TUBB1Q9H4B7 451 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 AKTIPQ9H8T0 292 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 CAPN10Q9HC96 672 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TMEM9BQ9NQ34 198 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 FSCN3Q9NQT6 498 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 KLC4Q9NSK0 619 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 RIC8BQ9NVN3 520 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 TIMM22Q9Y584 194 aa14.21□□□□□ -0.13
POLR2J3-204ENST00000486319 SPTBN4Q9H254 2564 aa14.21□□□□□ -0.14
POLR2J3-204ENST00000486319 LOC100653049A0A140TA62 436 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 ATP6AP2A0A1C7CYW4 349 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 C4orf47A7E2U8 309 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 GPR89AB7ZAQ6 455 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 H3BM21 787 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 CDX4O14627 284 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 MGRN1O60291 552 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 ATP6AP2O75787 350 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 KRT34O76011 436 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 SYPP08247 313 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 EBLN1P0CF75 366 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 GPR89BP0CG08 455 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 HGFP14210 728 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 ZNF8P17098 575 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 LBPP18428 481 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 CD27P26842 260 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 PBLDP30039 288 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 STX1BP61266 288 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 CDK3Q00526 305 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 TRAF3Q13114 568 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 SGCGQ13326 291 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 CYLC2Q14093 348 aaPredicted RBP14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 MAPRE2Q15555 327 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 FBXW10Q5XX13 1052 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 LETMD1Q6P1Q0 360 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 NEK5Q6P3R8 708 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 MBOAT1Q6ZNC8 495 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 DGLUCYQ7Z3D6 616 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 POU5F2Q8N7G0 328 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 CDYL2Q8N8U2 506 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 OR2L2Q8NH16 312 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 ATL1Q8WXF7 558 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 TUBGCP3Q96CW5 907 aa14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 GTPBP2Q9BX10 602 aaKnown RBP14.2□□□□□ -0.14
POLR2J3-204ENST00000486319 C1QTNF7Q9BXJ2 289 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms