RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 CPNE3O75131 537 aaKnown RBP12.08□□□□□ -0.48
PTCD1-205ENST00000485746 TIAF1O95411 115 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 KLK3P07288 261 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-205ENST00000485746 MPC1LP0DKB6 136 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 CBSLP0DN79 551 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ENO3P13929 434 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-205ENST00000485746 CBSP35520 551 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 STAT5AP42229 794 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 SKIV2L2P42285 1042 aaKnown RBP12.08□□□□□ -0.48
PTCD1-205ENST00000485746 CLCN7P51798 805 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ITGA1P56199 1179 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 MC1RQ01726 317 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 MGAT5Q09328 741 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 TEDDM1Q5T9Z0 273 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 C16orf46Q6P387 395 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ZNF549Q6P9A3 640 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 CAPN12Q6ZSI9 719 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 CDHR3Q6ZTQ4 885 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 KIAA0408Q6ZU52 694 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 NEK10Q6ZWH5 1172 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 FAM20CQ8IXL6 584 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 OR9A1PQ8NGU1 263 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 MR1Q95460 341 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ZNF501Q96CX3 271 aaPredicted RBP12.08□□□□□ -0.48
PTCD1-205ENST00000485746 CLIP3Q96DZ5 547 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 SLC30A3Q99726 388 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 PITPNM3Q9BZ71 974 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 SAYSD1Q9NPB0 183 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ABCF3Q9NUQ8 709 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 ZFATQ9P243 1243 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 CROTQ9UKG9 612 aa12.08□□□□□ -0.48
PTCD1-205ENST00000485746 USP24Q9UPU5 2620 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 EPG5Q9HCE0 2579 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 ASPMQ8IZT6 3477 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 ERVH48-1M5A8F1 160 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 MATN4O95460 622 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 AHSGP02765 367 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 PRKAR1AP10644 381 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 TCN2P20062 427 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 SAT1P21673 171 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 MCM3P25205 808 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 OAS2P29728 719 aaKnown RBP12.07□□□□□ -0.48
PTCD1-205ENST00000485746 RPA3P35244 121 aaPredicted RBP12.07□□□□□ -0.48
PTCD1-205ENST00000485746 PLTPP55058 493 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 CYP4F2P78329 520 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 CAV1Q03135 178 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
PTCD1-205ENST00000485746 GBX1Q14549 363 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 WHAMMP3Q1A5X7 153 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 DEFB110Q30KQ9 67 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 CCSMST1Q4G0I0 132 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 TRMT10BQ6PF06 316 aaKnown RBP12.07□□□□□ -0.48
PTCD1-205ENST00000485746 FIGLAQ6QHK4 219 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 UBE2R2Q712K3 238 aaPredicted RBP12.07□□□□□ -0.48
PTCD1-205ENST00000485746 CCDC25Q86WR0 208 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 CPNE9Q8IYJ1 553 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 LINC01555Q8NAE3 123 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 OR1L3Q8NH93 324 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 SNRNP27Q8WVK2 155 aaKnown RBP12.07□□□□□ -0.48
PTCD1-205ENST00000485746 ACTR5Q9H9F9 607 aaPredicted RBP12.07□□□□□ -0.48
PTCD1-205ENST00000485746 LHX9Q9NQ69 397 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 SPATA7Q9P0W8 599 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 KCND3Q9UK17 655 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 KLHL20Q9Y2M5 609 aa12.07□□□□□ -0.48
PTCD1-205ENST00000485746 ACACAQ13085 2346 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 KRT87PA6NCN2 255 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 ARHGEF33A8MVX0 844 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 KIF2AO00139 706 aaPredicted RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 EIF3HO15372 352 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 PSIP1O75475 530 aaKnown RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 OR2B3O76000 313 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 TUBB4AP04350 444 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 HBQ1P09105 142 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 WT1P19544 449 aaPredicted RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 MAGP20916 626 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 CMPK1P30085 196 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 PEBP1P30086 187 aaKnown RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 HSD17B2P37059 387 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 RPS15P62841 145 aaKnown RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 GRB7Q14451 532 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 FASTKD3Q14CZ7 662 aaKnown RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 RBM20Q5T481 1227 aaKnown RBP12.06□□□□□ -0.48
PTCD1-205ENST00000485746 THEMIS2Q5TEJ8 643 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 PRAMEF17Q5VTA0 474 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 STEAP4Q687X5 459 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 DUPD1Q68J44 220 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 LRRC8EQ6NSJ5 796 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 C8orf74Q6P047 294 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 CNTN4Q8IWV2 1026 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 SYTL1Q8IYJ3 562 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 MYO1HQ8N1T3 1032 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 MNS1Q8NEH6 495 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 GIMAP7Q8NHV1 300 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 CD200R1Q8TD46 325 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 MCOLN3Q8TDD5 553 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 CT55Q8WUE5 264 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 SMPDL3AQ92484 453 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 STARD8Q92502 1023 aa12.06□□□□□ -0.48
PTCD1-205ENST00000485746 SLC39A7Q92504 469 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms