RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 MAGP20916 626 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 CD9P21926 228 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 TTPAP49638 278 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 RAPSNQ13702 412 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 SLC9A5Q14940 896 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 TMED2Q15363 201 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 INPP5JQ15735 1006 aaPredicted RBP16.5■□□□□ 0.23
SMC4-216ENST00000485645 NKAIN1Q4KMZ8 207 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 PCID2Q5JVF3 399 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 UNC5DQ6UXZ4 953 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 LDB1Q86U70 411 aaPredicted RBP16.5■□□□□ 0.23
SMC4-216ENST00000485645 DCUN1D3Q8IWE4 304 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 FAM20CQ8IXL6 584 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 RBMXL3Q8N7X1 1067 aaKnown RBP16.5■□□□□ 0.23
SMC4-216ENST00000485645 LINC01555Q8NAE3 123 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 CLEC1AQ8NC01 280 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 OR2Y1Q8NGV0 311 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 LKAAEAR1Q8TD35 194 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 PSMG3-AS1Q96PY0 264 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 EURLQ9NYK6 297 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.5■□□□□ 0.23
SMC4-216ENST00000485645 C5AR2Q9P296 337 aa16.5■□□□□ 0.23
SMC4-216ENST00000485645 ESPL1Q14674 2120 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 ANKRD12Q6UB98 2062 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 BLACEA4D250 179 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 CD3EAPO15446 510 aaKnown RBP16.49■□□□□ 0.23
SMC4-216ENST00000485645 SLCO2B1O94956 709 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 S1PR4O95977 384 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 ZSCAN5DPP0CG00 497 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 ALAS2P22557 587 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 AOAHP28039 575 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 RPL22P35268 128 aaKnown RBP16.49■□□□□ 0.23
SMC4-216ENST00000485645 RPS6KA1Q15418 735 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 CCNG2Q16589 344 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 FHL5Q5TD97 284 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 VWA5B1Q5TIE3 1220 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 SLC6A19Q695T7 634 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 PTRHD1Q6GMV3 140 aaKnown RBP16.49■□□□□ 0.23
SMC4-216ENST00000485645 MRPL14Q6P1L8 145 aaKnown RBP16.49■□□□□ 0.23
SMC4-216ENST00000485645 TTC23LQ6PF05 361 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 KRT222Q8N1A0 295 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 C2orf73Q8N5S3 287 aaPredicted RBP16.49■□□□□ 0.23
SMC4-216ENST00000485645 GSDMBQ8TAX9 411 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 DENND1AQ8TEH3 1009 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 DLG3Q92796 817 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 PNPLA2Q96AD5 504 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 PTERQ96BW5 349 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 IL17FQ96PD4 163 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 PANX3Q96QZ0 392 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 MENTQ9BUN1 341 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 LRRC4CQ9HCJ2 640 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 INTS7Q9NVH2 962 aaKnown RBP16.49■□□□□ 0.23
SMC4-216ENST00000485645 LUZP4Q9P127 313 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 CIDEBQ9UHD4 219 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 SLC39A10Q9ULF5 831 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 KLHL20Q9Y2M5 609 aa16.49■□□□□ 0.23
SMC4-216ENST00000485645 SHANK1Q9Y566 2161 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 PCSK5Q92824 1860 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 KLHL41O60662 606 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 VARSP26640 1264 aaKnown RBP16.48■□□□□ 0.23
SMC4-216ENST00000485645 ARSFP54793 590 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 SESN2P58004 480 aaPredicted RBP16.48■□□□□ 0.23
SMC4-216ENST00000485645 GRB7Q14451 532 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 SF1Q15637 639 aaKnown RBP16.48■□□□□ 0.23
SMC4-216ENST00000485645 DCAF10Q5QP82 559 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 MEI1Q5TIA1 1274 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 TAX1BP1Q86VP1 789 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 MCATQ8IVS2 390 aaKnown RBP16.48■□□□□ 0.23
SMC4-216ENST00000485645 LMNTD1Q8N9Z9 388 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 Q8NA96 180 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 OR2L8Q8NGY9 312 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 IL22Q9GZX6 179 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 EIF2B3Q9NR50 452 aaKnown RBP16.48■□□□□ 0.23
SMC4-216ENST00000485645 P4HTMQ9NXG6 502 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 MARCH4Q9P2E8 410 aaPredicted RBP16.48■□□□□ 0.23
SMC4-216ENST00000485645 MAP10Q9P2G4 905 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 GNPTGQ9UJJ9 305 aa16.48■□□□□ 0.23
SMC4-216ENST00000485645 PRRC2CQ9Y520 2896 aaKnown RBP16.48■□□□□ 0.23
SMC4-216ENST00000485645 SPTAN1Q13813 2472 aaKnown RBP16.47■□□□□ 0.23
SMC4-216ENST00000485645 AP3B1O00203 1094 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 RASGRF2O14827 1237 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 KPNA5O15131 536 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 CNOT3O75175 753 aaKnown RBP16.47■□□□□ 0.23
SMC4-216ENST00000485645 NDUFS3O75489 264 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 AGFG2O95081 481 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 ALPPP05187 535 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 NPY2RP49146 381 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 CRADDP78560 199 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 BASP1P80723 227 aaKnown RBP16.47■□□□□ 0.23
SMC4-216ENST00000485645 MYBPC3Q14896 1274 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 CYP2A13Q16696 494 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 PRR30Q53SZ7 412 aaPredicted RBP16.47■□□□□ 0.23
SMC4-216ENST00000485645 ZC3H12BQ5HYM0 836 aaKnown RBP16.47■□□□□ 0.23
SMC4-216ENST00000485645 FIGLAQ6QHK4 219 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 C4orf22Q6V702 233 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 TTLL10Q6ZVT0 673 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 MPP5Q8N3R9 675 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 GALNT16Q8N428 558 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 RAB11FIP5Q9BXF6 653 aa16.47■□□□□ 0.23
SMC4-216ENST00000485645 P2RY12Q9H244 342 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms