RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	SAMD9	Q5K651	1589 aa		3.75	□□□□□ -1.81
VPS8-223	ENST00000485024	ADGRL2	O95490	1459 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024		A0A0U1RQK1	487 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	MED19	A0JLT2	244 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF320	A2RRD8	509 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	CCDC144A	A2RUR9	1427 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	TRIM64	A6NGJ6	449 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	OOEP	A6NGQ2	149 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	TRIM64B	A6NI03	449 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ACOT8	O14734	319 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	T	O15178	435 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	LUC7L3	O95232	432 aa	Known RBP	3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF23	P17027	643 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	USP8	P40818	1118 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	MLLT10	P55197	1068 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	CLDN20	P56880	219 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	KRTAP10-8	P60410	259 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	YWHAH	Q04917	246 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ACSM1	Q08AH1	577 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	TRAF1	Q13077	416 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	LTBP1	Q14766	1721 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	SLMAP	Q14BN4	828 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	MEP1B	Q16820	701 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	TYSND1	Q2T9J0	566 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	C2orf76	Q3KRA6	126 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	KRTAP24-1	Q3LI83	254 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ASPRV1	Q53RT3	343 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	MPP7	Q5T2T1	576 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	SHE	Q5VZ18	495 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	FIGLA	Q6QHK4	219 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	LINC00696	Q6ZRV3	163 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ABI3BP	Q7Z7G0	1075 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	UBR1	Q8IWV7	1749 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	KLHL7	Q8IXQ5	586 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	RNF113B	Q8IZP6	322 aa	Known RBP	3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	KCNH5	Q8NCM2	988 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	CTCFL	Q8NI51	663 aa	Predicted RBP	3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	PSMA8	Q8TAA3	256 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	PIGT	Q969N2	578 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	MOB3A	Q96BX8	217 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	SPDL1	Q96EA4	605 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	HNRNPAB	Q99729	332 aa	Known RBP	3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	LMF2	Q9BU23	707 aa	Known RBP	3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	FNDC11	Q9BVV2	318 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ADPRHL2	Q9NX46	363 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	ERAP1	Q9NZ08	941 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	PCDHAC2	Q9Y5I4	1007 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	NFS1	Q9Y697	457 aa		3.74	□□□□□ -1.81
VPS8-223	ENST00000485024	LRRC37A3	O60309	1634 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	TTC21A	Q8NDW8	1320 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	ELOVL7	A1L3X0	281 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	LILRA5	A6NI73	299 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024		H0YAE9	185 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	MEIS2	O14770	477 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	SPRY1	O43609	319 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	GPR137B	O60478	399 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	GBA	P04062	536 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	H1F0	P07305	194 aa	Known RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	PRSS2	P07478	247 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	OR52Z1	P0C646	297 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	SAG	P10523	405 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	GABRA5	P31644	462 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	GNL1	P36915	607 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	AMPH	P49418	695 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	TUBB4B	P68371	445 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	RPL36A	P83881	106 aa	Known RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	UBXN1	Q04323	297 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	CRYZ	Q08257	329 aa	Known RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	NFATC4	Q14934	902 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	CDO1	Q16878	200 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	MRGPRG-AS1	Q2M3A8	158 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	SMU1	Q2TAY7	513 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	FAM174B	Q3ZCQ3	159 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	FUT11	Q495W5	492 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	NHSL2	Q5HYW2	709 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	SLC10A5	Q5PT55	438 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	FAM69B	Q5VUD6	431 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	ALS2CL	Q60I27	953 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	FAM91A1	Q658Y4	838 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	PRR27	Q6MZM9	219 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	ENPP7	Q6UWV6	458 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	TLK2	Q86UE8	772 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF595	Q8IYB9	648 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	CCDC170	Q8IYT3	715 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	RYBP	Q8N488	228 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	CHCHD4	Q8N4Q1	142 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	ZNF713	Q8N859	430 aa	Predicted RBP	3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	SLC4A11	Q8NBS3	891 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	RND1	Q92730	232 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	MR1	Q95460	341 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	RHBDF1	Q96CC6	855 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	NEURL2	Q9BR09	285 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	DESI2	Q9BSY9	194 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	FUT8	Q9BYC5	575 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	PANK2	Q9BZ23	570 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	LRMDA	Q9H2I8	198 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	FN3K	Q9H479	309 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	IL1RAPL2	Q9NP60	686 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	TCP11L1	Q9NUJ3	509 aa		3.73	□□□□□ -1.81
VPS8-223	ENST00000485024	ABCB8	Q9NUT2	735 aa		3.73	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 39 ms