RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 ZNF655Q8N720 491 aaPredicted RBP11.02□□□□□ -0.64
SCFD1-206ENST00000484733 LINC01555Q8NAE3 123 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 PPHLN1Q8NEY8 458 aaKnown RBP11.02□□□□□ -0.64
SCFD1-206ENST00000484733 OR6P1Q8NGX9 317 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 LKAAEAR1Q8TD35 194 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 ZNF778Q96MU6 729 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 ZNF285Q96NJ3 590 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 RAB11FIP5Q9BXF6 653 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 SLAMF7Q9NQ25 335 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 RAB6BQ9NRW1 208 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 INTS7Q9NVH2 962 aaKnown RBP11.02□□□□□ -0.64
SCFD1-206ENST00000484733 DRG1Q9Y295 367 aaKnown RBP11.02□□□□□ -0.64
SCFD1-206ENST00000484733 MRFAP1Q9Y605 127 aa11.02□□□□□ -0.64
SCFD1-206ENST00000484733 DOPEY2Q9Y3R5 2298 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 A6NL46 340 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 PRMT5O14744 637 aaPredicted RBP11.02□□□□□ -0.65
SCFD1-206ENST00000484733 RASGRF2O14827 1237 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 IPO13O94829 963 aaKnown RBP11.02□□□□□ -0.65
SCFD1-206ENST00000484733 ALBP02768 609 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 CTSBP07858 339 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 PIM1P11309 404 aaPredicted RBP11.02□□□□□ -0.65
SCFD1-206ENST00000484733 CD9P21926 228 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 RPS3P23396 243 aaKnown RBP eCLIP11.02□□□□□ -0.65
SCFD1-206ENST00000484733 TTPAP49638 278 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 MYBPC3Q14896 1274 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 TMED2Q15363 201 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 CCNG2Q16589 344 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 ZC3H12BQ5HYM0 836 aaKnown RBP11.02□□□□□ -0.65
SCFD1-206ENST00000484733 DCAF10Q5QP82 559 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 CLEC1AQ8NC01 280 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 C1orf54Q8WWF1 131 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 SLC29A3Q9BZD2 475 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 P2RY12Q9H244 342 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 SLC26A1Q9H2B4 701 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 LRRC4CQ9HCJ2 640 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 CATSPERZQ9NTU4 200 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 DHCR7Q9UBM7 475 aaKnown RBP11.02□□□□□ -0.65
SCFD1-206ENST00000484733 ANAPC5Q9UJX4 755 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 KLK4Q9Y5K2 254 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 SHANK1Q9Y566 2161 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 NUP210LQ5VU65 1888 aa11.02□□□□□ -0.65
SCFD1-206ENST00000484733 TARM1B6A8C7 271 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 KPNA5O15131 536 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 IFNB1P01574 187 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 UMODP07911 640 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 NPY2RP49146 381 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 HSPA14Q0VDF9 509 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 SIX1Q15475 284 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-206ENST00000484733 FCRL6Q6DN72 434 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 PPP1R32Q7Z5V6 425 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 GALNT16Q8N428 558 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 HMGCLL1Q8TB92 370 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 ZUFSPQ96AP4 578 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 PANX3Q96QZ0 392 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 ZNF552Q9H707 407 aaPredicted RBP11.01□□□□□ -0.65
SCFD1-206ENST00000484733 WDR54Q9H977 334 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 SLC22A11Q9NSA0 550 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 TREX1Q9NSU2 369 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 P4HTMQ9NXG6 502 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 IL1RAPL1Q9NZN1 696 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 ZKSCAN5Q9Y2L8 839 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 PCM1Q15154 2024 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 FITM1A5D6W6 292 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 DSCR3O14972 297 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 CD3EAPO15446 510 aaKnown RBP11.01□□□□□ -0.65
SCFD1-206ENST00000484733 DDAH2O95865 285 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 ETS1P14921 441 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 MAGP20916 626 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 RPL22P35268 128 aaKnown RBP11.01□□□□□ -0.65
SCFD1-206ENST00000484733 CRB2Q5IJ48 1285 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 TCTE1Q5JU00 501 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 MEI1Q5TIA1 1274 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 ARMC3Q5W041 872 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 FIGLAQ6QHK4 219 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 OVCH1Q7RTY7 1134 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 CCDC89Q8N998 374 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 SSC4DQ8WTU2 575 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 MFRPQ9BY79 579 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 MRM3Q9HC36 420 aaKnown RBP11.01□□□□□ -0.65
SCFD1-206ENST00000484733 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 CHRAC1Q9NRG0 131 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 GNPTGQ9UJJ9 305 aa11.01□□□□□ -0.65
SCFD1-206ENST00000484733 A0A1B0GX78 115 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 IQCF5A8MTL0 148 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 SEC16AO15027 2179 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 KRT86O43790 486 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 AGFG2O95081 481 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 ALPPP05187 535 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 APRTP07741 180 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 ITGAXP20702 1163 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 CSE1LP55060 971 aaKnown RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 PLEKHN1Q494U1 663 aaPredicted RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 TTC23LQ6PF05 361 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 GAS2L3Q86XJ1 694 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 LMNTD1Q8N9Z9 388 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 RAD51AP1Q96B01 352 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 IL22Q9GZX6 179 aa11□□□□□ -0.65
SCFD1-206ENST00000484733 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 MARCH4Q9P2E8 410 aaPredicted RBP11□□□□□ -0.65
SCFD1-206ENST00000484733 FLNCQ14315 2725 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms