RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 GPR27Q9NS67 375 aa16.73■□□□□ 0.27
MRPL28-210ENST00000483764 TMEM45AQ9NWC5 275 aa16.73■□□□□ 0.27
MRPL28-210ENST00000483764 GEMIN8Q9NWZ8 242 aaKnown RBP16.73■□□□□ 0.27
MRPL28-210ENST00000483764 C6orf203Q9P0P8 240 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-210ENST00000483764 FBXO4Q9UKT5 387 aa16.73■□□□□ 0.27
MRPL28-210ENST00000483764 POMPQ9Y244 141 aa16.73■□□□□ 0.27
MRPL28-210ENST00000483764 A0A0C4DFX4 3053 aa16.73■□□□□ 0.27
MRPL28-210ENST00000483764 SUPT3HB4E1H0 165 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 GFYI3L273 518 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 SLC16A5O15375 505 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 SUPT3HO75486 399 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 MATN4O95460 622 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 CD38P28907 300 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 SRP54P61011 504 aaKnown RBP16.72■□□□□ 0.27
MRPL28-210ENST00000483764 DMPKQ09013 629 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 TGFBIQ15582 683 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 PPP1R3AQ16821 1122 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 SPATS1Q496A3 300 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 ZNF678Q5SXM1 525 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 FRA10AC1Q70Z53 315 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 UBE2R2Q712K3 238 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-210ENST00000483764 RD3Q7Z3Z2 195 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 DHDDSQ86SQ9 333 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 DCP2Q8IU60 420 aaKnown RBP16.72■□□□□ 0.27
MRPL28-210ENST00000483764 MFSD2AQ8NA29 543 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 DNASE2BQ8WZ79 361 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 TSACCQ96A04 125 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-210ENST00000483764 PDXPQ96GD0 296 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 OR2M4Q96R27 311 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 SLC12A9Q9BXP2 914 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 MIR1-1HGQ9H1L0 117 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 WDR55Q9H6Y2 383 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-210ENST00000483764 TRAF6Q9Y4K3 522 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 OARD1Q9Y530 152 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 CACNA1IQ9P0X4 2223 aa16.72■□□□□ 0.27
MRPL28-210ENST00000483764 SPTY2D1-AS1A0A0U1RR47 76 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 LOC100653049A0A140TA62 436 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 BBIP1A8MTZ0 92 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 KRT34O76011 436 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 GFAPP14136 432 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 MAPK9P45984 424 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 NUDT2P50583 147 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 HK3P52790 923 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 SESN3P58005 492 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 SP140Q13342 867 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 PHKG1Q16816 387 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 PFKFB4Q16877 469 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 ALG11Q2TAA5 492 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 WDR45BQ5MNZ6 344 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 C11orf74Q86VG3 221 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 IQCHQ86VS3 1027 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 RASGRP3Q8IV61 690 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 RGL4Q8IZJ4 473 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 DSELQ8IZU8 1212 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 GAB3Q8WWW8 586 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 PHF21BQ96EK2 531 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 FOPNLQ96NB1 174 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 SLC25A23Q9BV35 468 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 C1QTNF3Q9BXJ4 246 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 OR52A5Q9H2C5 316 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 GSTO2Q9H4Y5 243 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 CXorf56Q9H5V9 222 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 RDH14Q9HBH5 336 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 PARVBQ9HBI1 364 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 TM9SF3Q9HD45 589 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 CD274Q9NZQ7 290 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 ACSL5Q9ULC5 683 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 PNMA8BQ9ULN7 279 aaPredicted RBP16.71■□□□□ 0.27
MRPL28-210ENST00000483764 PLEKHM1Q9Y4G2 1056 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 MUC3AQ02505 3323 aa16.71■□□□□ 0.27
MRPL28-210ENST00000483764 A0A1W2PR77 199 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 NCF1BA6NI72 391 aaPredicted RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 NCF1CA8MVU1 366 aaPredicted RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 STX16-NPEPL1H3BU86 382 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 STX16O14662 325 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 CASQ2O14958 399 aaPredicted RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 UBDO15205 165 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 KLK8O60259 260 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 SNX2O60749 519 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 ENO2P09104 434 aaPredicted RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 NCF1P14598 390 aaPredicted RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 STX1BP61266 288 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 FZD2Q14332 565 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 PDCD2Q16342 344 aaPredicted RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 ARMCX6Q7L4S7 300 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 HID1Q8IV36 788 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 FBXO39Q8N4B4 442 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 PTGR2Q8N8N7 351 aaPredicted RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 C1orf216Q8TAB5 229 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 TSPEARQ8WU66 669 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 CLPTM1LQ96KA5 538 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 TRIM54Q9BYV2 358 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 NUDT4Q9NZJ9 180 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 PDE10AQ9Y233 779 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 KCNK6Q9Y257 313 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 COPG1Q9Y678 874 aaKnown RBP16.7■□□□□ 0.26
MRPL28-210ENST00000483764 DGKBQ9Y6T7 804 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 PLXND1Q9Y4D7 1925 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 TTC28Q96AY4 2481 aa16.7■□□□□ 0.26
MRPL28-210ENST00000483764 AIM2O14862 343 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms