RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 CCL11P51671 97 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 DRG2P55039 364 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 TPM4P67936 248 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 IFI35P80217 286 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 CDK18Q07002 472 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 AP1B1Q10567 949 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 TMEM115Q12893 351 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SLC10A2Q12908 348 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ZBTB17Q13105 803 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SLC14A2Q15849 920 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 UGT8Q16880 541 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ANO6Q4KMQ2 910 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ODF2Q5BJF6 829 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 DNTTIP2Q5QJE6 756 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 CAPRIN2Q6IMN6 1127 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PWWP2BQ6NUJ5 590 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ARMC6Q6NXE6 501 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 TMEM135Q86UB9 458 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 AMZ2Q86W34 360 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 OOSP2Q86WS3 158 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 KMT5CQ86Y97 462 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF547Q8IVP9 402 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PQLC3Q8N755 202 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 OR8K5Q8NH50 307 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SSC4DQ8WTU2 575 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 COG1Q8WTW3 980 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 CTNNBL1Q8WYA6 563 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 FAF2Q96CS3 445 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 EID2BQ96D98 161 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 IQCDQ96DY2 449 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 IMP4Q96G21 291 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SLC41A2Q96JW4 573 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF514Q96K75 400 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SCYL1Q96KG9 808 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 NAP1L5Q96NT1 182 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 AGAP3Q96P47 875 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 RNF157Q96PX1 679 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 TRIB3Q96RU7 358 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ANP32EQ9BTT0 268 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 MENTQ9BUN1 341 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 MAK16Q9BXY0 300 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SLC29A3Q9BZD2 475 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ING2Q9H160 280 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SLC25A51Q9H1U9 297 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 TRABDQ9H4I3 376 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 FGF21Q9NSA1 209 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 OXSMQ9NWU1 459 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 SEMA5BQ9P283 1151 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 CTTNBP2NLQ9P2B4 639 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PLEKHB1Q9UF11 243 aaPredicted RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 TRHDEQ9UKU6 1024 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 FARSAQ9Y285 508 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 PCDHGA9Q9Y5G4 932 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 HEY1Q9Y5J3 304 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 NOTCH2Q04721 2471 aa5.73□□□□□ -1.49
CSDE1-207ENST00000483407 ZFC3H1O60293 1989 aaKnown RBP5.73□□□□□ -1.49
CSDE1-207ENST00000483407 A0A087X0T9 212 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 A0A0A6YYK5 440 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-207ENST00000483407 IGHV5-51A0A0C4DH38 117 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 LRRD1A4D1F6 860 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 TLCD2A6NGC4 264 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ARGFXA6NJG6 315 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ZNF487B1APH4 448 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 APOL1O14791 398 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 DPM1O60762 260 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 SCRG1O75711 98 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ZBTB11O95625 1053 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-207ENST00000483407 NDST3O95803 873 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 DDAH2O95865 285 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 H2AFZP0C0S5 128 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 FAM228BP0C875 321 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 EBLN1P0CF75 366 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 CD8BP10966 210 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ZFXP17010 805 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-207ENST00000483407 LPOP22079 712 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-207ENST00000483407 KDELR1P24390 212 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 HMGCLP35914 325 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 CD96P40200 585 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 GSDMDP57764 484 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 TAS2R40P59535 323 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 TUBB4BP68371 445 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 HSD11B2P80365 405 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ZBED6P86452 979 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 DMPKQ09013 629 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 XRCC4Q13426 336 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ITGA9Q13797 1035 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 TUBB2AQ13885 445 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 KCNAB1Q14722 419 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 NR1I3Q14994 352 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 PDK1Q15118 436 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 CHRNA6Q15825 494 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 RPE65Q16518 533 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 ATP13A5Q4VNC0 1218 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 LDLRAP1Q5SW96 308 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 TMTC4Q5T4D3 741 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 MROH9Q5TGP6 573 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 H2AFVQ71UI9 128 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 BZW1Q7L1Q6 419 aaKnown RBP5.72□□□□□ -1.49
CSDE1-207ENST00000483407 C11orf96Q7Z7L8 435 aa5.72□□□□□ -1.49
CSDE1-207ENST00000483407 VSIG1Q86XK7 387 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms