RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 NCSTNQ92542 709 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 RSC1A1Q92681 617 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 EXT2Q93063 718 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 GPR78Q96P69 363 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 LRRN3Q9H3W5 708 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 ALG9Q9H6U8 611 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 PARVBQ9HBI1 364 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 FAM53CQ9NYF3 392 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 EMCNQ9ULC0 261 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 GRID1Q9ULK0 1009 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 ICKQ9UPZ9 632 aa19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 APOBEC2Q9Y235 224 aaKnown RBP19.33■□□□□ 0.68
TRAPPC12-220ENST00000482645 OR6C74A6NCV1 312 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 TK2O00142 265 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 ZWINTO95229 277 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 GUCA1CO95843 209 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 HIST1H2AGP0C0S8 130 aaPredicted RBP19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 TPBGLP0DKB5 382 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 HIST1H2ADP20671 130 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 ATP6V0D1P61421 351 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 GPLD1P80108 840 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 ILKQ13418 452 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 GRB7Q14451 532 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 MBOAT1Q6ZNC8 495 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 TAX1BP1Q86VP1 789 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 MCOLN3Q8TDD5 553 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 PTERQ96BW5 349 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 HIST1H2AHQ96KK5 128 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 GFM1Q96RP9 751 aaKnown RBP19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 HIST1H2AJQ99878 128 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 H2AFJQ9BTM1 129 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 SLC12A9Q9BXP2 914 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 TFB2MQ9H5Q4 396 aaKnown RBP19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 DLL3Q9NYJ7 618 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 PDE10AQ9Y233 779 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 PLLPQ9Y342 182 aa19.32■□□□□ 0.68
TRAPPC12-220ENST00000482645 A0A1W2PQM1 296 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 TM9SF1O15321 606 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 SLC16A5O15375 505 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 CD1CP29017 333 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 HOXD11P31277 338 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 SHMT2P34897 504 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 CLDN6P56747 220 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 TSTA3Q13630 321 aaPredicted RBP19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 SPIDRQ14159 915 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 ACAP2Q15057 778 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 OR4D1Q15615 310 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 TECRLQ5HYJ1 363 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 SBSNQ6UWP8 590 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 ADAMTSL2Q86TH1 951 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 RAB42Q8N4Z0 105 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 ARMC2Q8NEN0 867 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 OR9A1PQ8NGU1 263 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 MDM1Q8TC05 714 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 PKP4Q99569 1192 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 TRIM54Q9BYV2 358 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 CPSF2Q9P2I0 782 aaKnown RBP19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 PCDHGA1Q9Y5H4 931 aa19.31■□□□□ 0.68
TRAPPC12-220ENST00000482645 GSAPA4D1B5 854 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 PLIN3O60664 434 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 PROCP04070 461 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 POLR2CP19387 275 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 PKLRP30613 574 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 RAB28P51157 221 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 CCDC153Q494R4 210 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 ARMC6Q6NXE6 501 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 IRGCQ6NXR0 463 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 KLHL35Q6PF15 583 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 OOSP2Q86WS3 158 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 ARFGAP2Q8N6H7 521 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 PAIP2Q9BPZ3 127 aaKnown RBP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 NUDT22Q9BRQ3 303 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 ABCF3Q9NUQ8 709 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 HRASLS2Q9NWW9 162 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 ARL15Q9NXU5 204 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 OGFRQ9NZT2 677 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 KLHL3Q9UH77 587 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 LNPEPQ9UIQ6 1025 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 RNF112Q9ULX5 631 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 NCF1BA6NI72 391 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 NCF1CA8MVU1 366 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 MYO1CO00159 1063 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 BTN3A3O00478 584 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 SLC16A8O95907 504 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 NCF1P14598 390 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 CHN1P15882 459 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 MPSTP25325 297 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 CSF2RBP32927 897 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 CAPZBP47756 277 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 E2F1Q01094 437 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 PRKAA1Q13131 559 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 PUM1Q14671 1186 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 RASGRP3Q8IV61 690 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 SYTL1Q8IYJ3 562 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 DENND1AQ8TEH3 1009 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 KIAA1191Q96A73 305 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 EGFL8Q99944 293 aa19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 MRPL46Q9H2W6 279 aaKnown RBP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 CNOT10Q9H9A5 744 aaKnown RBP19.3■□□□□ 0.68
TRAPPC12-220ENST00000482645 OR5K3A6NET4 321 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms