RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 CD1DP15813 335 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 H2AFXP16104 143 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-212ENST00000480461 NDUFS1P28331 727 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 PEBP1P30086 187 aaKnown RBP11.85□□□□□ -0.51
TRA2B-212ENST00000480461 MAPK9P45984 424 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 RGS4P49798 205 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 PDX1P52945 283 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 EPHA4P54764 986 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 SLC12A2P55011 1212 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 E2F1Q01094 437 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 ZNF844Q08AG5 666 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 BIRC2Q13490 618 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 FASTKQ14296 549 aaKnown RBP11.85□□□□□ -0.51
TRA2B-212ENST00000480461 CSHL1Q14406 222 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 RASA2Q15283 850 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 OR4D1Q15615 310 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 PPP1R3AQ16821 1122 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 SBSNQ6UWP8 590 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 MBOAT1Q6ZNC8 495 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 UBE2R2Q712K3 238 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-212ENST00000480461 B3GNT8Q7Z7M8 397 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 ISCA2Q86U28 154 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 AMIGO1Q86WK6 493 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 DCUN1D3Q8IWE4 304 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 NKAPQ8N5F7 415 aaKnown RBP11.85□□□□□ -0.51
TRA2B-212ENST00000480461 FBXO15Q8NCQ5 510 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-212ENST00000480461 KCTD4Q8WVF5 259 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 LCN9Q8WX39 176 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 NCSTNQ92542 709 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 TMEM109Q9BVC6 243 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 DERL2Q9GZP9 239 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 SEMA6CQ9H3T2 930 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 CLMPQ9H6B4 373 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 PDP2Q9P2J9 529 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 PSMC3IPQ9P2W1 217 aaPredicted RBP11.85□□□□□ -0.51
TRA2B-212ENST00000480461 POLG2Q9UHN1 485 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 ACOT9Q9Y305 439 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 IKBKGQ9Y6K9 419 aa11.85□□□□□ -0.51
TRA2B-212ENST00000480461 COL6A6A6NMZ7 2263 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 A0A1W2PNU3 283 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-212ENST00000480461 NPEPPSL1A6NEC2 478 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 ERVH48-1M5A8F1 160 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 BTN3A1O00481 513 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 RASGRF2O14827 1237 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 SLC16A5O15375 505 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 SLC16A8O95907 504 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 POLR2CP19387 275 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-212ENST00000480461 CNTFP26441 200 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 PKLRP30613 574 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 LSSP48449 732 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 SERPINB8P50452 374 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 GFERP55789 205 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
TRA2B-212ENST00000480461 TLE3Q04726 772 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 ZFP36L1Q07352 338 aaKnown RBP11.84□□□□□ -0.51
TRA2B-212ENST00000480461 RTP5Q14D33 572 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 TSNQ15631 228 aaKnown RBP11.84□□□□□ -0.51
TRA2B-212ENST00000480461 MAP9Q49MG5 647 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 RAPH1Q70E73 1250 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 CLEC14AQ86T13 490 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 LRRC56Q8IYG6 542 aaPredicted RBP11.84□□□□□ -0.51
TRA2B-212ENST00000480461 MYO1HQ8N1T3 1032 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 TMEM151AQ8N4L1 468 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 AVL9Q8NBF6 648 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 OR9A1PQ8NGU1 263 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 ZNF480Q8WV37 535 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 ANKRD7Q92527 254 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 RAD51AP1Q96B01 352 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 FOPNLQ96NB1 174 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 ZIM3Q96PE6 472 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 ABCG4Q9H172 646 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 VPS11Q9H270 941 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 SRMSQ9H3Y6 488 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 PARVBQ9HBI1 364 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 HRASLS2Q9NWW9 162 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 AK5Q9Y6K8 562 aa11.84□□□□□ -0.51
TRA2B-212ENST00000480461 COL27A1Q8IZC6 1860 aaPredicted RBP11.83□□□□□ -0.52
TRA2B-212ENST00000480461 A0A087X1B8 175 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 IGHV5-10-1A0A0J9YXX1 117 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 A0A1W2PPV9 198 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 OR5K3A6NET4 321 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 PYCARD-AS1I3L0S3 204 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 GOLGA8RI6L899 631 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 KLHL2O95198 593 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 MT-CO3P00414 261 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 C9P02748 559 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 CATP04040 527 aaKnown RBP11.83□□□□□ -0.52
TRA2B-212ENST00000480461 C8GP07360 202 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 LTA4HP09960 611 aaKnown RBP11.83□□□□□ -0.52
TRA2B-212ENST00000480461 SBK3P0C264 359 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 PYGBP11216 843 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 ERGP11308 486 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 JUPP14923 745 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 AMD1P17707 334 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 SLC26A3P40879 764 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 CCNFP41002 786 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 KPNA2P52292 529 aaKnown RBP11.83□□□□□ -0.52
TRA2B-212ENST00000480461 CXADRP78310 365 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 GPLD1P80108 840 aa11.83□□□□□ -0.52
TRA2B-212ENST00000480461 PLCL1Q15111 1095 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms