RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 SLC22A14Q9Y267 594 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.06■□□□□ 0.32
UPF3A-206ENST00000480362 R4GN57 208 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 SPAG17Q6Q759 2223 aa17.06■□□□□ 0.32
UPF3A-206ENST00000480362 KIR2DS5A0A0G2JLQ3 304 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 A0A0G2JNG1 304 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 E7ENX8 843 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 KIR2DS3K7RE56 304 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 MLYCDO95822 493 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 FAM107AO95990 144 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 KITP10721 976 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 EPB42P16452 691 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 HSD17B2P37059 387 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 RXRGP48443 463 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 SH3BP2P78314 561 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 TAP2Q03519 686 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 SF3A3Q12874 501 aaKnown RBP eCLIP17.05■□□□□ 0.324e-6■■■■□ 22.2
UPF3A-206ENST00000480362 BNIP3Q12983 259 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 LCP2Q13094 533 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 FASTKQ14296 549 aaKnown RBP17.05■□□□□ 0.32
UPF3A-206ENST00000480362 KIR2DS5Q14953 304 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 ARHGAP19Q14CB8 494 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 CYP2A13Q16696 494 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 CGB2Q6NT52 195 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 RABEPKQ7Z6M1 372 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 CUZD1Q86UP6 607 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 THOC6Q86W42 341 aaKnown RBP17.05■□□□□ 0.32
UPF3A-206ENST00000480362 TRIM48Q8IWZ4 208 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 KLHDC8AQ8IYD2 350 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 LRRC56Q8IYG6 542 aaPredicted RBP17.05■□□□□ 0.32
UPF3A-206ENST00000480362 RAB42Q8N4Z0 105 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 SNX31Q8N9S9 440 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 OR52E1Q8NGJ3 308 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 ATP6V1E2Q96A05 226 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 GRAMD1AQ96CP6 724 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 THOC1Q96FV9 657 aaKnown RBP17.05■□□□□ 0.32
UPF3A-206ENST00000480362 ELAC2Q9BQ52 826 aaKnown RBP17.05■□□□□ 0.32
UPF3A-206ENST00000480362 MENTQ9BUN1 341 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 IPPKQ9H8X2 491 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 MID1IP1Q9NPA3 183 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 FSCN3Q9NQT6 498 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 DNAJC11Q9NVH1 559 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 INTS7Q9NVH2 962 aaKnown RBP17.05■□□□□ 0.32
UPF3A-206ENST00000480362 UCKL1Q9NWZ5 548 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 ZDHHC2Q9UIJ5 367 aa17.05■□□□□ 0.32
UPF3A-206ENST00000480362 TP53BP1Q12888 1972 aaPredicted RBP17.05■□□□□ 0.32
UPF3A-206ENST00000480362 PATE3B3GLJ2 98 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 B4DGG1 531 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 LMO7DNF2Z398 122 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 OR7A17O14581 309 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 TGDSO95455 350 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 VIPP01282 170 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 ANXA6P08133 673 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 ERGP11308 486 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 PIK3CGP48736 1102 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 ARRB1P49407 418 aaPredicted RBP17.04■□□□□ 0.32
UPF3A-206ENST00000480362 RPL14P50914 215 aaKnown RBP17.04■□□□□ 0.32
UPF3A-206ENST00000480362 GRIK2Q13002 908 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 TSTA3Q13630 321 aaPredicted RBP17.04■□□□□ 0.32
UPF3A-206ENST00000480362 SHBQ15464 509 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF423Q2M1K9 1284 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 CAPN13Q6MZZ7 669 aaPredicted RBP17.04■□□□□ 0.32
UPF3A-206ENST00000480362 SFRP1Q8N474 314 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 C2orf73Q8N5S3 287 aaPredicted RBP17.04■□□□□ 0.32
UPF3A-206ENST00000480362 PIWIL2Q8TC59 973 aaKnown RBP17.04■□□□□ 0.32
UPF3A-206ENST00000480362 AGR3Q8TD06 166 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 SLC37A2Q8TED4 501 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 AGAP11Q8TF27 550 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 LOXL4Q96JB6 756 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 XKR8Q9H6D3 395 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 KIR3DX1Q9H7L2 352 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 TNFRSF12AQ9NP84 129 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 ABCF3Q9NUQ8 709 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 CPNE7Q9UBL6 633 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 MARCOQ9UEW3 520 aaPredicted RBP17.04■□□□□ 0.32
UPF3A-206ENST00000480362 HAO1Q9UJM8 370 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 SLC6A14Q9UN76 642 aa17.04■□□□□ 0.32
UPF3A-206ENST00000480362 A0A1B0GTL3 188 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF839A8K0R7 811 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 KDM1AO60341 852 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 PRDX3P30048 256 aaKnown RBP17.03■□□□□ 0.32
UPF3A-206ENST00000480362 PKLRP30613 574 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 CCNG1P51959 295 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 TBPL1P62380 186 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 UBE2IP63279 158 aaKnown RBP17.03■□□□□ 0.32
UPF3A-206ENST00000480362 DEFB133Q30KQ1 61 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 HLA-BQ31612 363 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 SH2D4BQ5SQS7 431 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 SLC23A3Q6PIS1 610 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 SUSD1Q6UWL2 747 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 GPRIN3Q6ZVF9 776 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 SYVN1Q86TM6 617 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 SLC9B2Q86UD5 537 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 OR52B6Q8NGF0 335 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 BCAS4Q8TDM0 211 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 ZFPM2Q8WW38 1151 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 JPH3Q8WXH2 748 aaPredicted RBP17.03■□□□□ 0.32
UPF3A-206ENST00000480362 ZNF382Q96SR6 550 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 SGPP1Q9BX95 441 aa17.03■□□□□ 0.32
UPF3A-206ENST00000480362 TRIM55Q9BYV6 548 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms