RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 RCBTB1Q8NDN9 531 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 CCDC138Q96M89 665 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 IL17FQ96PD4 163 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 PKP4Q99569 1192 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 SNX15Q9NRS6 342 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 ACTR10Q9NZ32 417 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 PCDHGA8Q9Y5G5 932 aa19.1■□□□□ 0.65
LIME1-205ENST00000480139 CEP295Q9C0D2 2601 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 A0A087X1B8 175 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 RASSF9O75901 435 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 FKBP9O95302 570 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 SLC16A8O95907 504 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 LSSP48449 732 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 NAA30Q147X3 362 aaPredicted RBP19.09■□□□□ 0.65
LIME1-205ENST00000480139 RTP5Q14D33 572 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 RASA2Q15283 850 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 PPP1R3AQ16821 1122 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 SLC5A12Q1EHB4 618 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 SNAP47Q5SQN1 464 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 CACHD1Q5VU97 1274 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 IGF2-ASQ6U949 168 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 SPESP1Q6UW49 350 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 ADAMTSL2Q86TH1 951 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 FLVCR1-AS1Q8TAF5 88 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 KLHL6Q8WZ60 621 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 MTBPQ96DY7 904 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 MAP3K3Q99759 626 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 TRIM54Q9BYV2 358 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 POLR1BQ9H9Y6 1135 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 C1GALT1Q9NS00 363 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 PSMC3IPQ9P2W1 217 aaPredicted RBP19.09■□□□□ 0.65
LIME1-205ENST00000480139 KLHL3Q9UH77 587 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 CIDEBQ9UHD4 219 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 ACOT9Q9Y305 439 aa19.09■□□□□ 0.65
LIME1-205ENST00000480139 A0A1W2PNU3 283 aaPredicted RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 CCDC189A1A4V9 331 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 KRT87PA6NCN2 255 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 KIF1CO43896 1103 aaKnown RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 PRICKLE3O43900 615 aaPredicted RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 SNRPAP09012 282 aaKnown RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 NUDT17P0C025 328 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 HIST1H2AGP0C0S8 130 aaPredicted RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 CD1DP15813 335 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 UGT2B7P16662 529 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 HIST1H2ADP20671 130 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 TYK2P29597 1187 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 PEBP1P30086 187 aaKnown RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 CSTF2P33240 577 aaKnown RBP eCLIP19.08■□□□□ 0.64
LIME1-205ENST00000480139 MLLT3P42568 568 aaPredicted RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 PNLIPRP1P54315 467 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 PHKG1Q16816 387 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 KIF26BQ2KJY2 2108 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 TAF1BQ53T94 588 aaPredicted RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 TBC1D1Q86TI0 1168 aaPredicted RBP19.08■□□□□ 0.64
LIME1-205ENST00000480139 TDRPQ86YL5 185 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 ZNF480Q8WV37 535 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 NXPE2Q96DL1 559 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 SLC41A2Q96JW4 573 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 HIST1H2AHQ96KK5 128 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 OR2A14Q96R47 310 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 HIST1H2AJQ99878 128 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 H2AFJQ9BTM1 129 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 SPHK1Q9NYA1 384 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 CTNNAL1Q9UBT7 734 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 TLK1Q9UKI8 766 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 IKZF3Q9UKT9 509 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 SATB2Q9UPW6 733 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 LOXL2Q9Y4K0 774 aa19.08■□□□□ 0.64
LIME1-205ENST00000480139 IGHV5-51A0A0C4DH38 117 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 PABPN1LA6NDY0 278 aaKnown RBP19.07■□□□□ 0.64
LIME1-205ENST00000480139 A8MU76 341 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 CDC7O00311 574 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 PLD2O14939 933 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 ZBTB11O95625 1053 aaPredicted RBP19.07■□□□□ 0.64
LIME1-205ENST00000480139 SYF2O95926 243 aaKnown RBP19.07■□□□□ 0.64
LIME1-205ENST00000480139 SHBGP04278 402 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 C2P06681 752 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 IMPA1P29218 277 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 CDKL1Q00532 357 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 TIFABQ6ZNK6 161 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 LSMEM2Q8N112 164 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 FBXO39Q8N4B4 442 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 SMPDL3AQ92484 453 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 NMRAL1Q9HBL8 299 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 BTRCQ9Y297 605 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 OARD1Q9Y530 152 aa19.07■□□□□ 0.64
LIME1-205ENST00000480139 A0A096LPK6 155 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 A0A0J9YY10 115 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 IQANK1A0A1B0GTG1 560 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 A0A1W2PPV9 198 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 NPEPPSL1A6NEC2 478 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 TRABD2BA6NFA1 517 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 ISM1B1AKI9 464 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 B4E171 279 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 TRIM49D1C9J1S8 452 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 E7ENX8 843 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 DXOO77932 396 aaKnown RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 MPOP05164 745 aa19.06■□□□□ 0.64
LIME1-205ENST00000480139 LTA4HP09960 611 aaKnown RBP19.06■□□□□ 0.64
LIME1-205ENST00000480139 NELFEP18615 380 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms