RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PNOCQ13519 176 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 DPYSQ14117 519 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 FASTKQ14296 549 aaKnown RBP11.28□□□□□ -0.6
USP11-208ENST00000480104 FILIP1LQ4L180 1135 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 PPP6R3Q5H9R7 873 aaPredicted RBP11.28□□□□□ -0.6
USP11-208ENST00000480104 PPP1R15BQ5SWA1 713 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 BHLHB9Q6PI77 547 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 KDELC1Q6UW63 502 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 LAPTM4BQ86VI4 370 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 AMIGO1Q86WK6 493 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 BEND7Q8N7W2 519 aaPredicted RBP11.28□□□□□ -0.6
USP11-208ENST00000480104 OR52E1Q8NGJ3 308 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 PERPQ96FX8 193 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 UTP23Q9BRU9 249 aaKnown RBP11.28□□□□□ -0.6
USP11-208ENST00000480104 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 SIX2Q9NPC8 291 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 RAD18Q9NS91 495 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 RMND1Q9NWS8 449 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 Q9UFV3 132 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 ACSL5Q9ULC5 683 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 TTLL3Q9Y4R7 772 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 HEBP2Q9Y5Z4 205 aa11.28□□□□□ -0.6
USP11-208ENST00000480104 CLCA1A8K7I4 914 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 PIRTP0C851 137 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 MX2P20592 715 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 PON1P27169 355 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 CDH6P55285 790 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 KRT85P78386 507 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 OCA2Q04671 838 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 POU4F3Q15319 338 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 EXOC3L4Q17RC7 722 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 GPRC6AQ5T6X5 926 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 ALG1LQ6GMV1 187 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 UNC5DQ6UXZ4 953 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 GBP6Q6ZN66 633 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 LILRA3Q8N6C8 439 aaPredicted RBP11.27□□□□□ -0.61
USP11-208ENST00000480104 TEX26Q8N6G2 289 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 DENND1AQ8TEH3 1009 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 RBM41Q96IZ5 413 aaKnown RBP11.27□□□□□ -0.61
USP11-208ENST00000480104 OR2A14Q96R47 310 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 OLFM1Q99784 485 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 SELENOOQ9BVL4 669 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
USP11-208ENST00000480104 AMBRA1Q9C0C7 1298 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 ATG10Q9H0Y0 220 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 TFB2MQ9H5Q4 396 aaKnown RBP11.27□□□□□ -0.61
USP11-208ENST00000480104 NLRC4Q9NPP4 1024 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 TRRAPQ9Y4A5 3859 aa11.27□□□□□ -0.61
USP11-208ENST00000480104 KMT2CQ8NEZ4 4911 aaKnown RBP11.27□□□□□ -0.61
USP11-208ENST00000480104 A0A0J9YY10 115 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 RCCD1A6NED2 376 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 MGAT4DA6NG13 374 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 ANKRD66B4E2M5 251 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 EIF3CLB5ME19 914 aaKnown RBP11.26□□□□□ -0.61
USP11-208ENST00000480104 GPR39O43194 453 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 NEURL1O76050 574 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 POLBP06746 335 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 GLI4P10075 376 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 TFEBP19484 476 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 ADH7P40394 386 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 RFC3P40938 356 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 EMP2P54851 167 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 NIPAL4Q0D2K0 466 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 PTP4A2Q12974 167 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 MAPKAPK3Q16644 382 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 CHRFAM7AQ494W8 412 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 CMPK2Q5EBM0 449 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 FNBP1LQ5T0N5 605 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 SLC25A25Q6KCM7 469 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 BRSK1Q8TDC3 778 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 NAT14Q8WUY8 206 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 SLCO2A1Q92959 643 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 FERD3LQ96RJ6 166 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 EIF3CQ99613 913 aaKnown RBP11.26□□□□□ -0.61
USP11-208ENST00000480104 PIP5K1AQ99755 562 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 TTYH2Q9BSA4 534 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 HGH1Q9BTY7 390 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 SNRNP25Q9BV90 132 aaKnown RBP11.26□□□□□ -0.61
USP11-208ENST00000480104 ZNF700Q9H0M5 742 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 VPS16Q9H269 839 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 ETNK2Q9NVF9 386 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 SPHK1Q9NYA1 384 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 ZNF282Q9UDV7 671 aaPredicted RBP11.26□□□□□ -0.61
USP11-208ENST00000480104 RCOR1Q9UKL0 485 aa11.26□□□□□ -0.61
USP11-208ENST00000480104 DNMT3AQ9Y6K1 912 aaPredicted RBP11.26□□□□□ -0.61
USP11-208ENST00000480104 MBD3L4A6NDZ8 208 aaPredicted RBP11.25□□□□□ -0.61
USP11-208ENST00000480104 MBD3L5A6NJ08 208 aaPredicted RBP11.25□□□□□ -0.61
USP11-208ENST00000480104 SYT5O00445 386 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 MAN1A2O60476 641 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 PRMT3O60678 531 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 DNAJB6O75190 326 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 MED26O95402 600 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 GNA14O95837 355 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 HRGP04196 525 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 EPXP11678 715 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 ICAM2P13598 275 aa11.25□□□□□ -0.61
USP11-208ENST00000480104 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
USP11-208ENST00000480104 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
USP11-208ENST00000480104 OC90Q02509 493 aaPredicted RBP11.25□□□□□ -0.61
USP11-208ENST00000480104 PDLIM3Q53GG5 364 aaPredicted RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms