RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 INPP4BO15327 924 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 VEGFDO43915 354 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 NPHS1O60500 1241 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 AVILO75366 819 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GOT2P00505 430 aaKnown RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TNFP01375 233 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF806P0C7X5 589 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GPR89BP0CG08 455 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CTSEP14091 401 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GM2AP17900 193 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 MSH3P20585 1137 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GRK2P25098 689 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PMLP29590 882 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 AKT1P31749 480 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PHBP35232 272 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GRK3P35626 688 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TRIM23P36406 574 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SKIV2L2P42285 1042 aaKnown RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 MAGEA3P43357 314 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TRPC1P48995 793 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CSNK1EP49674 416 aaKnown RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 NXPH1P58417 271 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PFN3P60673 137 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 HNRNPKP61978 463 aaKnown RBP eCLIP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CRADDP78560 199 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CDK3Q00526 305 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PPARDQ03181 441 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GRIK2Q13002 908 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PDIA2Q13087 525 aaKnown RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 LSAMPQ13449 338 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 NFATC2Q13469 925 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SPIDRQ14159 915 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 MYBPC3Q14896 1274 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CHRNA6Q15825 494 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CSRP2Q16527 193 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CLPPQ16740 277 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 LONRF1Q17RB8 773 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 INAVAQ3KP66 663 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 AASDHQ4L235 1098 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CCDC92Q53HC0 331 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SPANXN3Q5MJ09 141 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 KIAA0930Q6ICG6 404 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 MRNIPQ6NTE8 343 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 LRIG3Q6UXM1 1119 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CERS6Q6ZMG9 384 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CCNI2Q6ZMN8 369 aaPredicted RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF534Q76KX8 674 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TAS2R42Q7RTR8 314 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SNX20Q7Z614 316 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PARGQ86W56 976 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CCDC25Q86WR0 208 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PALM2Q8IXS6 379 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 ZBED8Q8IZ13 594 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PLA2G15Q8NCC3 412 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 OR56A4Q8NGH8 313 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 OR13C4Q8NGS5 318 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 OR2W6PQ8NHA6 318 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PYROXD1Q8WU10 500 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SEC14L1Q92503 715 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SCAMP4Q969E2 229 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 HDAC10Q969S8 669 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CDKN2AIPNLQ96HQ2 116 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 KIRREL1Q96J84 757 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 BMFQ96LC9 184 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 RUFY1Q96T51 708 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 FMO2Q99518 471 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 EBNA1BP2Q99848 306 aaKnown RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 ORAI3Q9BRQ5 295 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 FAM167BQ9BTA0 163 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 G6PC3Q9BUM1 346 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 GTPBP2Q9BX10 602 aaKnown RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TSSK1BQ9BXA7 367 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TEX101Q9BY14 249 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SLC13A1Q9BZW2 595 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 VPS37BQ9H9H4 285 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 ERVMER34-1Q9H9K5 563 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SAYSD1Q9NPB0 183 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 IL26Q9NPH9 171 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 PPANQ9NQ55 473 aaKnown RBP6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CHRAC1Q9NRG0 131 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CATSPERZQ9NTU4 200 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TMEM74BQ9NUR3 256 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SMOXQ9NWM0 555 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 TNFRSF10DQ9UBN6 386 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 KLQ9UEF7 1012 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 CA5BQ9Y2D0 317 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 LRRC42Q9Y546 428 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 OR1A2Q9Y585 309 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 DOCK9Q9BZ29 2069 aa6.08□□□□□ -1.44
SF3B1-209ENST00000479532 SPTY2D1-AS1A0A0U1RR47 76 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF891A8MT65 544 aaPredicted RBP6.07□□□□□ -1.44
SF3B1-209ENST00000479532 FADS2P1A8MWK0 482 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 FAM47E-STBD1D6RA91 191 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 SPAG6O75602 509 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 VAPBO95292 243 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 WNT1P04628 370 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 LINGO3P0C6S8 592 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ALPPL2P10696 532 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF24P17028 368 aa6.07□□□□□ -1.44
SF3B1-209ENST00000479532 ZNF7P17097 686 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms