RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 ITFG2Q969R8 447 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 NSUN5Q96P11 429 aaKnown RBP14.03□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF607Q96SK3 696 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 RIOK2Q9BVS4 552 aaKnown RBP14.03□□□□□ -0.16
COL20A1-206ENST00000479501 ACTR3BQ9P1U1 418 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 OGDHLQ9ULD0 1010 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 INSL6Q9Y581 213 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 WNT9AO14904 365 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 GNA13Q14344 377 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 UNC50Q53HI1 259 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 MZT2AQ6P582 158 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 MACC1Q6ZN28 852 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 CPA6Q8N4T0 437 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 DNAJB8Q8NHS0 232 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF671Q8TAW3 534 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 KHSRPQ92945 711 aaKnown RBP eCLIP14.03□□□□□ -0.16
COL20A1-206ENST00000479501 OAZ3Q9UMX2 235 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 SLC27A6Q9Y2P4 619 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 PSMD11O00231 422 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 RGS10O43665 173 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 APODP05090 189 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 CTSEP14091 401 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 CAPGP40121 348 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 GSTM5P46439 218 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 PNLIPRP1P54315 467 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 FOXM1Q08050 763 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 GPAT3Q53EU6 434 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 C22orf39Q6P5X5 142 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 SLC2A7Q6PXP3 512 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 ZNF783Q6ZMS7 281 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 TRPV3Q8NET8 790 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 MRPL48Q96GC5 212 aaKnown RBP14.03□□□□□ -0.16
COL20A1-206ENST00000479501 Q96MT0 163 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 SLC22A14Q9Y267 594 aa14.03□□□□□ -0.16
COL20A1-206ENST00000479501 PDLIM1O00151 329 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 TOR1BO14657 336 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 PLOD3O60568 738 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 UGT2B11O75310 529 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 RNASEH2AO75792 299 aaKnown RBP14.02□□□□□ -0.16
COL20A1-206ENST00000479501 PGLSO95336 258 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 G6PDP11413 515 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 SFT2D3Q587I9 215 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 RABL3Q5HYI8 236 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 P2RY8Q86VZ1 359 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 IZUMO1Q8IYV9 350 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 MAGEE1Q9HCI5 957 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 USP3Q9Y6I4 520 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 BCKDKO14874 412 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 FABP3P05413 133 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 TNNI3P19429 210 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 PRPS1L1P21108 318 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 ABATP80404 500 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 PTSQ03393 145 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 PDCD4Q53EL6 469 aaKnown RBP14.02□□□□□ -0.16
COL20A1-206ENST00000479501 FRG2Q64ET8 278 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 OGFOD2Q6N063 350 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 PSRC1Q6PGN9 363 aaPredicted RBP14.02□□□□□ -0.16
COL20A1-206ENST00000479501 C16orf62Q7Z3J2 963 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 GATAD2AQ86YP4 633 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 ZDHHC21Q8IVQ6 265 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 ARHGAP12Q8IWW6 846 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 NXPE1Q8N323 547 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 WFIKKN2Q8TEU8 576 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 HSPBAP1Q96EW2 488 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 FRG2BQ96QU4 278 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 OR2AG1Q9H205 316 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 SSR3Q9UNL2 185 aa14.02□□□□□ -0.16
COL20A1-206ENST00000479501 PI15O43692 258 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 SLC28A2O43868 658 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 FGF18O76093 207 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 LGALS3BPQ08380 585 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 MERTKQ12866 999 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.02□□□□□ -0.17
COL20A1-206ENST00000479501 PDSS2Q86YH6 399 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 RAB43Q86YS6 212 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 ZNF366Q8N895 744 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 MAPK15Q8TD08 544 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 CYB5D2Q8WUJ1 264 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 MTRRQ9UBK8 725 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 DNAJB9Q9UBS3 223 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 ZNF222Q9UK12 451 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 BACE2Q9Y5Z0 518 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 ECM29Q5VYK3 1845 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 ANKRD12Q6UB98 2062 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 C2orf78A6NCI8 922 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 AURKAO14965 403 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 SOCS5O75159 536 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 ATP1B2P14415 290 aaPredicted RBP14.02□□□□□ -0.17
COL20A1-206ENST00000479501 ARPC4P59998 168 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 LAPTM5Q13571 262 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 SF1Q15637 639 aaKnown RBP14.02□□□□□ -0.17
COL20A1-206ENST00000479501 TYSND1Q2T9J0 566 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 PTCHD3Q3KNS1 767 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 CHMP1BQ7LBR1 199 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 SCML4Q8N228 414 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 HM13Q8TCT9 377 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 ZNF514Q96K75 400 aaPredicted RBP14.02□□□□□ -0.17
COL20A1-206ENST00000479501 VPS29Q9UBQ0 182 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 PDE10AQ9Y233 779 aa14.02□□□□□ -0.17
COL20A1-206ENST00000479501 FAM240BA0A1B0GVZ2 78 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms