RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 SH3BGRP55822 239 aaPredicted RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 RIPPLY3P57055 190 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 PPP2R2AP63151 447 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 LSM11P83369 360 aaKnown RBP eCLIP6.47□□□□□ -1.37
VCP-205ENST00000479300 PRKAA1Q13131 559 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 PPP1R7Q15435 360 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 P3H1Q32P28 736 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 LRRC23Q53EV4 343 aaPredicted RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 CRB2Q5IJ48 1285 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 FNBP1LQ5T0N5 605 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 FAM182AQ5T1J6 154 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 TMTC4Q5T4D3 741 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 GPRC6AQ5T6X5 926 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 C1QTNF12Q5T7M4 302 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 SEL1L2Q5TEA6 688 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 THEMIS2Q5TEJ8 643 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 HHATQ5VTY9 493 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 FAM92BQ6ZTR7 304 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 DET1Q7L5Y6 550 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 MAATS1Q7Z4T9 603 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 PRSS42Q7Z5A4 293 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 HOOK3Q86VS8 718 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 LMNTD2Q8IXW0 634 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 KIRREL3Q8IZU9 778 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 TTC30BQ8N4P2 665 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 GBP7Q8N8V2 638 aaPredicted RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 RASGEF1AQ8N9B8 481 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 SIDT2Q8NBJ9 832 aaKnown RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 DDHD1Q8NEL9 900 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 FDCSPQ8NFU4 85 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 ACTL9Q8TC94 416 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 LZICQ8WZA0 190 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 KRT35Q92764 455 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 INPP5DQ92835 1189 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 EID2BQ96D98 161 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 SNRNP40Q96DI7 357 aaKnown RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 OXNAD1Q96HP4 312 aaPredicted RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 TTC1Q99614 292 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 TBL1YQ9BQ87 522 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 CCM2Q9BSQ5 444 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 ING2Q9H160 280 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 UGT1A7Q9HAW7 530 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 UGT1A10Q9HAW8 530 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 UGT1A8Q9HAW9 530 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 PDE7BQ9NP56 450 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 PPANQ9NQ55 473 aaKnown RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 IMP3Q9NV31 184 aaKnown RBP6.47□□□□□ -1.37
VCP-205ENST00000479300 ASF1BQ9NVP2 202 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 SEMA5BQ9P283 1151 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 FAM8A1Q9UBU6 413 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 ACSL5Q9ULC5 683 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 PSMD13Q9UNM6 376 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 TFR2Q9UP52 801 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 NTNG1Q9Y2I2 539 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 HEBP2Q9Y5Z4 205 aa6.47□□□□□ -1.37
VCP-205ENST00000479300 ZFHX3Q15911 3703 aa6.46□□□□□ -1.37
VCP-205ENST00000479300 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 MGAT4DA6NG13 374 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 OR52A4PA6NMU1 304 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 IFRD1O00458 451 aaPredicted RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 ZSCAN9O15535 394 aaPredicted RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 KDM1AO60341 852 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 SMIM24O75264 130 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 SRP72O76094 671 aaKnown RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 KRT14P02533 472 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 CAPN1P07384 714 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 EBLN1P0CF75 366 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 NQO1P15559 274 aaKnown RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 PSMB4P28070 264 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 CAPZBP47756 277 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 CD151P48509 253 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 ITGA1P56199 1179 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 TMPRSS15P98073 1019 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 ACY1Q03154 408 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 DMPKQ09013 629 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 CUL1Q13616 776 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 GPR18Q14330 331 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 RPE65Q16518 533 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 SPRED3Q2MJR0 410 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 PARP6Q2NL67 630 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 PLEKHN1Q494U1 663 aaPredicted RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 GPR33Q49SQ1 333 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 KHDC1Q4VXA5 237 aaKnown RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 ZRANB3Q5FWF4 1079 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 PRAMEF17Q5VTA0 474 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 ZNF517Q6ZMY9 492 aaPredicted RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 TAS2R42Q7RTR8 314 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 LINC00523Q86TU6 105 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 BPHLQ86WA6 291 aaPredicted RBP6.46□□□□□ -1.38
VCP-205ENST00000479300 OOSP2Q86WS3 158 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 PPP1R3BQ86XI6 285 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 ZNF547Q8IVP9 402 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 TMEM151BQ8IW70 566 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 CFAP206Q8IYR0 622 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 OR4K2Q8NGD2 314 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 CCDC110Q8TBZ0 833 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 AGAP11Q8TF27 550 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 ZFPM2Q8WW38 1151 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 THAP4Q8WY91 577 aa6.46□□□□□ -1.38
VCP-205ENST00000479300 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms