RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SP140Q13342 867 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 CUL1Q13616 776 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 NAA25Q14CX7 972 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 STRA8Q7Z7C7 330 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 EIF1ADQ8N9N8 165 aaKnown RBP14.96□□□□□ -0.01
C9orf3-217ENST00000479161 LINC01555Q8NAE3 123 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 OR9A1PQ8NGU1 263 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 CFAP61Q8NHU2 1237 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 SNRNP27Q8WVK2 155 aaKnown RBP14.96□□□□□ -0.01
C9orf3-217ENST00000479161 SKA2Q8WVK7 121 aaPredicted RBP14.96□□□□□ -0.01
C9orf3-217ENST00000479161 TCTN2Q96GX1 697 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 TRAPPC9Q96Q05 1148 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 CPNE1Q99829 537 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 FUT8Q9BYC5 575 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 FAM117AQ9C073 453 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 PILRAQ9UKJ1 303 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 SLC39A10Q9ULF5 831 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 NFS1Q9Y697 457 aa14.96□□□□□ -0.01
C9orf3-217ENST00000479161 A0A0J9YY10 115 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 ESYT3A0FGR9 886 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 GSAPA4D1B5 854 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 ZNF500O60304 480 aaPredicted RBP14.95□□□□□ -0.02
C9orf3-217ENST00000479161 C8GP07360 202 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 UGT2B7P16662 529 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 STX2P32856 288 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 ARL4DP49703 201 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 SEPHS1P49903 392 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 CDKN2DP55273 166 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 IL2P60568 153 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 TLE3Q04726 772 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 CLN3Q13286 438 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 RBM20Q5T481 1227 aaKnown RBP14.95□□□□□ -0.02
C9orf3-217ENST00000479161 HECTD2Q5U5R9 776 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 PPP1R3BQ86XI6 285 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 SPACA3Q8IXA5 215 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 LMNTD1Q8N9Z9 388 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 ZUFSPQ96AP4 578 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 OR6C1Q96RD1 312 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 SLC12A9Q9BXP2 914 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 XKR8Q9H6D3 395 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 FGF21Q9NSA1 209 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 FOXJ2Q9P0K8 574 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 PSAT1Q9Y617 370 aa14.95□□□□□ -0.02
C9orf3-217ENST00000479161 ARHGEF33A8MVX0 844 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 TARM1B6A8C7 271 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 TSPAN12O95859 305 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 DLGAP3O95886 979 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 FOLR1P15328 257 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 MAP4P27816 1152 aaKnown RBP14.94□□□□□ -0.02
C9orf3-217ENST00000479161 GP5P40197 560 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 POU4F1Q01851 419 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 RELAQ04206 551 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 BROXQ5VW32 411 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 PAQR3Q6TCH7 311 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 IFT20Q8IY31 132 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 CPNE9Q8IYJ1 553 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 CNPY4Q8N129 248 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 DENND1AQ8TEH3 1009 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 FAM136AQ96C01 138 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 ZNF501Q96CX3 271 aaPredicted RBP14.94□□□□□ -0.02
C9orf3-217ENST00000479161 VPS39Q96JC1 886 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 FMO2Q99518 471 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 NDNQ99608 321 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 SMYD2Q9NRG4 433 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 INTS7Q9NVH2 962 aaKnown RBP14.94□□□□□ -0.02
C9orf3-217ENST00000479161 SPHK1Q9NYA1 384 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 TXNDC16Q9P2K2 825 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 RARRES3Q9UL19 164 aa14.94□□□□□ -0.02
C9orf3-217ENST00000479161 SLC9B1P1A6NJY1 282 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 MT-ND3P03897 115 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 ENO2P09104 434 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-217ENST00000479161 ST6GAL1P15907 406 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 MCM3P25205 808 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 OAS2P29728 719 aaKnown RBP14.93□□□□□ -0.02
C9orf3-217ENST00000479161 ECHS1P30084 290 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 PEBP1P30086 187 aaKnown RBP14.93□□□□□ -0.02
C9orf3-217ENST00000479161 PHBP35232 272 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 ABCG1P45844 678 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 SH3BP2P78314 561 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 FOXM1Q08050 763 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 PDAP1Q13442 181 aaKnown RBP14.93□□□□□ -0.02
C9orf3-217ENST00000479161 TUBB3Q13509 450 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.93□□□□□ -0.02
C9orf3-217ENST00000479161 GRTP1Q5TC63 336 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 CCDC91Q7Z6B0 441 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 CCDC25Q86WR0 208 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 MYO1HQ8N1T3 1032 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
C9orf3-217ENST00000479161 GPATCH11Q8N954 259 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 MCOLN3Q8TDD5 553 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 EEF1AKMT1Q8WVE0 214 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 SMPDL3AQ92484 453 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 CCDC138Q96M89 665 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 LRFN5Q96NI6 719 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 GPR22Q99680 433 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 FANCEQ9HB96 536 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 PARVBQ9HBI1 364 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 APMAPQ9HDC9 416 aa14.93□□□□□ -0.02
C9orf3-217ENST00000479161 NOVA2Q9UNW9 492 aaKnown RBP14.93□□□□□ -0.02
C9orf3-217ENST00000479161 PCDHB3Q9Y5E6 796 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms