RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 SPATA22Q8NHS9 363 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 LPIN3Q9BQK8 851 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 TSEN34Q9BSV6 310 aaKnown RBP20.76■□□□□ 0.91
SDF4-206ENST00000478938 ZNF277Q9NRM2 450 aaPredicted RBP20.76■□□□□ 0.91
SDF4-206ENST00000478938 OGDHLQ9ULD0 1010 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 SHROOM3Q8TF72 1996 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 EFCAB10A6NFE3 127 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 MYO1GB0I1T2 1018 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 CXCR6O00574 342 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 ZNF623O75123 536 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 DNAJB2P25686 324 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 EVI2BP34910 448 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 NUDT6P53370 316 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 XKR3Q5GH77 459 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 ZFAND4Q86XD8 727 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 MRPL4Q9BYD3 311 aaKnown RBP20.75■□□□□ 0.91
SDF4-206ENST00000478938 BARHL1Q9BZE3 327 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 TMEM134Q9H6X4 195 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 POLMQ9NP87 494 aaPredicted RBP20.75■□□□□ 0.91
SDF4-206ENST00000478938 TAS2R16Q9NYV7 291 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 VAPAQ9P0L0 249 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 ERVW-1Q9UQF0 538 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 WASHC1A8K0Z3 465 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 SCAMP3O14828 347 aaKnown RBP20.75■□□□□ 0.91
SDF4-206ENST00000478938 LCP1P13796 627 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 SAXO2Q658L1 398 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 TSPYL5Q86VY4 417 aaPredicted RBP20.75■□□□□ 0.91
SDF4-206ENST00000478938 OR2T11Q8NH01 316 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 C12orf42Q96LP6 360 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 ZNF578Q96N58 590 aaPredicted RBP20.75■□□□□ 0.91
SDF4-206ENST00000478938 THUMPD3Q9BV44 507 aaKnown RBP20.75■□□□□ 0.91
SDF4-206ENST00000478938 SEMA4BQ9NPR2 832 aaPredicted RBP20.75■□□□□ 0.91
SDF4-206ENST00000478938 FAM105AQ9NUU6 356 aa20.75■□□□□ 0.91
SDF4-206ENST00000478938 QSER1Q2KHR3 1735 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 A0A075B6Q4 140 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 A0A1W2PRG6 482 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 YDJCA8MPS7 323 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 CSF3P09919 207 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 CD72P21854 359 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 CPN2P22792 545 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 CLCN7P51798 805 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 MAP2K6P52564 334 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 SEMA3AQ14563 771 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 GRM7Q14831 915 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 PAFAH1B3Q15102 231 aaKnown RBP20.74■□□□□ 0.91
SDF4-206ENST00000478938 CYP27C1Q4G0S4 372 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 KDM4DQ6B0I6 523 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 Q6ZPB1 254 aaPredicted RBP20.74■□□□□ 0.91
SDF4-206ENST00000478938 P3H2Q8IVL5 708 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 FAM126BQ8IXS8 530 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 DPP10Q8N608 796 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 ST8SIA4Q92187 359 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 ZNF668Q96K58 619 aaPredicted RBP20.74■□□□□ 0.91
SDF4-206ENST00000478938 MRGPRX2Q96LB1 330 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 GLIS2Q9BZE0 524 aaPredicted RBP20.74■□□□□ 0.91
SDF4-206ENST00000478938 BRINP2Q9C0B6 783 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 C3orf14Q9HBI5 128 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 PXMP2Q9NR77 195 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 VIPP01282 170 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 PRR35P0CG20 571 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 RASAL3Q86YV0 1011 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 SLAIN1Q8ND83 568 aa20.74■□□□□ 0.91
SDF4-206ENST00000478938 GFM1Q96RP9 751 aaKnown RBP20.74■□□□□ 0.91
SDF4-206ENST00000478938 TRIM45Q9H8W5 580 aaPredicted RBP20.74■□□□□ 0.91
SDF4-206ENST00000478938 GOLGB1Q14789 3259 aaKnown RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 PLA2G10O15496 165 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 NUPL2O15504 423 aaKnown RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 DIRAS1O95057 198 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 MLYCDO95822 493 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 SERPINA1P01009 418 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 STSP08842 583 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 GMPSP49915 693 aaPredicted RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 CDKN2DP55273 166 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 RPP38P78345 283 aaKnown RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 PRKG2Q13237 762 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 VEPH1Q14D04 833 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 GRIK4Q16099 956 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 HECTD2Q5U5R9 776 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 KIAA1614Q5VZ46 1190 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 FAM131AQ6UXB0 335 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 CCDC149Q6ZUS6 474 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 ACOT1Q86TX2 421 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 NPWQ8N729 165 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 NDRG1Q92597 394 aaKnown RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 ZDHHC15Q96MV8 337 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 JPH1Q9HDC5 661 aaPredicted RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 GPR83Q9NYM4 423 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 RCOR3Q9P2K3 495 aaPredicted RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 PSORS1C1Q9UIG5 152 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 TLR6Q9Y2C9 796 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 FAM72CH0Y354 149 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 DCLK1O15075 740 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 MT-CYBP00156 380 aaPredicted RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 NPPAP01160 153 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 JCHAINP01591 159 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 YWHAHQ04917 246 aaPredicted RBP20.73■□□□□ 0.91
SDF4-206ENST00000478938 HKDC1Q2TB90 917 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 FAM72AQ5TYM5 149 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 FAM72DQ6L9T8 149 aa20.73■□□□□ 0.91
SDF4-206ENST00000478938 KDELC2Q7Z4H8 507 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms