RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 SLC39A1Q9NY26 324 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 OR6C2Q9NZP2 312 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 FOXJ2Q9P0K8 574 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 PDP2Q9P2J9 529 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 KLHL42Q9P2K6 505 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 RAXQ9Y2V3 346 aa6.68□□□□□ -1.34
BRCA1-215ENST00000478531 V9GYY5 206 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-215ENST00000478531 MDC1Q14676 2089 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 TMEM8BA6NDV4 472 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 PABPN1LA6NDY0 278 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 SLC9B1P1A6NJY1 282 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 TOX3O15405 576 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 PSIP1O75475 530 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 DXOO77932 396 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 ZBTB11O95625 1053 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 MPC1LP0DKB6 136 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 ST6GAL1P15907 406 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 NELFEP18615 380 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 CD9P21926 228 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 PSMB5P28074 263 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 PEBP1P30086 187 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 GP5P40197 560 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 MLLT3P42568 568 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 PCBP4P57723 403 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 TAS2R39P59534 338 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 IL2P60568 153 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 TUBB3Q13509 450 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 GRB7Q14451 532 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 USP10Q14694 798 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 TMEM164Q5U3C3 297 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 ANKS6Q68DC2 871 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 LRRC8EQ6NSJ5 796 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 MBOAT1Q6ZNC8 495 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 NEK10Q6ZWH5 1172 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 PROSER1Q86XN7 944 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 CEP97Q8IW35 865 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 PPFIBP2Q8ND30 876 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 OR2L8Q8NGY9 312 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 UBXN4Q92575 508 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF578Q96N58 590 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 OR6C1Q96RD1 312 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 CYTH2Q99418 400 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 CD180Q99467 661 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 MENTQ9BUN1 341 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 RAB11FIP5Q9BXF6 653 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 UNKQ9C0B0 810 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 GPAMQ9HCL2 828 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 ADAMTS6Q9UKP5 1117 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 ZMIZ1Q9ULJ6 1067 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 MTO1Q9Y2Z2 717 aaKnown RBP6.67□□□□□ -1.34
BRCA1-215ENST00000478531 B3GALT1Q9Y5Z6 326 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 KALRNO60229 2985 aa6.67□□□□□ -1.34
BRCA1-215ENST00000478531 NPEPPSL1A6NEC2 478 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CDRT15L2A8MXV6 281 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 C9orf172C9J069 976 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 EIF3FO00303 357 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 POLR1CO15160 346 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PHGDHO43175 533 aaKnown RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ZBTB14O43829 449 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TSPAN12O95859 305 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SLC16A8O95907 504 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 C1QAP02745 245 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 FAM153BP0C7A2 387 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MYBL2P10244 700 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 FOLR1P15328 257 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ZNF37AP17032 561 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CYP2A7P20853 494 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SPRP35270 261 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 RAB15P59190 212 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ERVPABLB-1P60509 514 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 HSD11B2P80365 405 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 POU4F1Q01851 419 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 NAB1Q13506 487 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 BMPR2Q13873 1038 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 FASTKQ14296 549 aaKnown RBP6.66□□□□□ -1.34
BRCA1-215ENST00000478531 KIR2DS3Q14952 304 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 GPR19Q15760 415 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 FAM153CQ494X1 144 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 DCAF12Q5T6F0 453 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SUSD1Q6UWL2 747 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CYS1Q717R9 158 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 CMC1Q7Z7K0 106 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 RASGRP3Q8IV61 690 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SYTL1Q8IYJ3 562 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 BMPERQ8N8U9 685 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 OR9A1PQ8NGU1 263 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 DENND1AQ8TEH3 1009 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ASB11Q8WXH4 323 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 KLHL6Q8WZ60 621 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 FGF11Q92914 225 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 OR2A14Q96R47 310 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 TAAR9Q96RI9 348 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 PKP4Q99569 1192 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 GPR22Q99680 433 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 MCMBPQ9BTE3 642 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ACAT2Q9BWD1 397 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 ACSS3Q9H6R3 686 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 C1GALT1Q9NS00 363 aa6.66□□□□□ -1.34
BRCA1-215ENST00000478531 SIDT1Q9NXL6 827 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms