RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 UGT2B4P06133 528 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 NUDT7P0C024 238 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SDHBP21912 280 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 FDXRP22570 491 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SMARCB1Q12824 385 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 CTU2Q2VPK5 515 aaKnown RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 KLHL17Q6TDP4 642 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 DCDC5Q6ZRR9 648 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 ADCK2Q7Z695 626 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SCAMP4Q969E2 229 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 MAELQ96JY0 434 aaKnown RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 HEPHQ9BQS7 1158 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 UGT2B28Q9BY64 529 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.54□□□□□ -0.88
CMC1-209ENST00000477739 ZNF385DQ9H6B1 395 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 CAPN10Q9HC96 672 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 AIG1Q9NVV5 245 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 MAP4K5Q9Y4K4 846 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SQORQ9Y6N5 450 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 RFXAPO00287 272 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 LSM1O15116 133 aaKnown RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 ACSL4O60488 711 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 TSC22D2O75157 780 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 MYO1DO94832 1006 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SLC10A3P09131 477 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 CD36P16671 472 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 MYF6P23409 242 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 FEN1P39748 380 aaKnown RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 CDKN2CP42773 168 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 BCAP31P51572 246 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 CYP4F8P98187 520 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 CHRNA6Q15825 494 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 ATP6AP1Q15904 470 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 RTP2Q5QGT7 225 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 C6orf141Q5SZD1 244 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 STX19Q8N4C7 294 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 NKAPQ8N5F7 415 aaKnown RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 ZBTB20Q9HC78 741 aaPredicted RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 PALMDQ9NP74 551 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 FAM118AQ9NWS6 357 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 C3orf18Q9UK00 162 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 ABCG2Q9UNQ0 655 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 BOLA1Q9Y3E2 137 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 PCDHGA11Q9Y5H2 935 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 H7C4K7 107 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 DLGAP1O14490 977 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 CLPXO76031 633 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 RAP2AP10114 183 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 GNPDA1P46926 289 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SERPINB10P48595 397 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 RPIAP49247 311 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SLC11A1P49279 550 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 PRIM2P49643 509 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 RAB25P57735 213 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 AQP6Q13520 282 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 TTC23Q5W5X9 447 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 NADSYN1Q6IA69 706 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 VANGL1Q8TAA9 524 aaPredicted RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 SLC22A17Q8WUG5 538 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 ITFG2Q969R8 447 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 TTPALQ9BTX7 342 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 FAM126AQ9BYI3 521 aaPredicted RBP9.54□□□□□ -0.88
CMC1-209ENST00000477739 MRGBPQ9NV56 204 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 TRPM5Q9NZQ8 1165 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 PSME2Q9UL46 239 aa9.54□□□□□ -0.88
CMC1-209ENST00000477739 SPTBP11277 2137 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 BBIP1A8MTZ0 92 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 H3BN98 237 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 SLC22A2O15244 555 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 RGS14O43566 566 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 PRAMEF11O60813 436 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 PAPSS2O95340 614 aaPredicted RBP9.53□□□□□ -0.88
CMC1-209ENST00000477739 ZNF7P17097 686 aaPredicted RBP9.53□□□□□ -0.88
CMC1-209ENST00000477739 ITGALP20701 1170 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 TTPAP49638 278 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 NFKB2Q00653 900 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 IRF8Q02556 426 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 HKDC1Q2TB90 917 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 HECTD3Q5T447 861 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 RSPO2Q6UXX9 243 aaPredicted RBP9.53□□□□□ -0.88
CMC1-209ENST00000477739 NANOGNBQ7Z5D8 188 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 CYP4Z1Q86W10 505 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 ADHFE1Q8IWW8 467 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 SPARTQ8N0X7 666 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 SH3KBP1Q96B97 665 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 Q96MT0 163 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 CSF3RQ99062 836 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 TRIM54Q9BYV2 358 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 SLC2A11Q9BYW1 496 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 AMBRA1Q9C0C7 1298 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 ZFYVE1Q9HBF4 777 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 ARNT2Q9HBZ2 717 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 INTS10Q9NVR2 710 aaKnown RBP9.53□□□□□ -0.88
CMC1-209ENST00000477739 GIN1Q9NXP7 522 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 PCDHB14Q9Y5E9 798 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 KRBA1A5PL33 1030 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 SLC38A8A6NNN8 435 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 CLDN25C9JDP6 229 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 FAM227AF5H4B4 570 aa9.53□□□□□ -0.88
CMC1-209ENST00000477739 CREG1O75629 220 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms