RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 SIK3Q9Y2K2 1263 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 ZKSCAN5Q9Y2L8 839 aa4.52□□□□□ -1.69
CKS1B-207ENST00000477676 GTF3C1Q12789 2109 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 SPG11Q96JI7 2443 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PALMO75781 387 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 APOL3O95236 402 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 FGFR1OPO95684 399 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PDHA1P08559 390 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 TCF4P15884 667 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 CTPS1P17812 591 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ERCC2P18074 760 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 KELP23276 732 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 TEAD1P28347 426 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 SERPINA4P29622 427 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 SOX5P35711 763 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ACTR1BP42025 376 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 SCNN1BP51168 640 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 NDST2P52849 883 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 GFERP55789 205 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ACTR1AP61163 376 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 POLR2FP61218 127 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 BCL2L1Q07817 233 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 NSUN2Q08J23 767 aaKnown RBP eCLIP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ILF3Q12906 894 aaKnown RBP eCLIP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 KLRB1Q12918 225 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 LAMB3Q13751 1172 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 DPYSQ14117 519 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 GRM3Q14832 879 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 DPCR1Q3MIW9 517 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PRR30Q53SZ7 412 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 DCAF12Q5T6F0 453 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 DENND2CQ68D51 928 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 MARK2Q7KZI7 788 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ZNF677Q86XU0 584 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ADGRG3Q86Y34 549 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PHF13Q86YI8 300 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 NRSN1Q8IZ57 195 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 C3orf20Q8ND61 904 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 OR5M3Q8NGP4 307 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 APOBEC4Q8WW27 367 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PIH1D2Q8WWB5 315 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 COX14Q96I36 57 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 MCEEQ96PE7 176 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PSKH2Q96QS6 385 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 MCCC1Q96RQ3 725 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 DCLRE1CQ96SD1 692 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 CNPY3Q9BT09 278 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 SYT11Q9BT88 431 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 SNRNP25Q9BV90 132 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 GSDMCQ9BYG8 508 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ASPSCR1Q9BZE9 553 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 NOD2Q9HC29 1040 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 NLRC4Q9NPP4 1024 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PHPT1Q9NRX4 125 aaPredicted RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 TMEM51Q9NW97 253 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 TAB2Q9NYJ8 693 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 TAS2R14Q9NYV8 317 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 CWC15Q9P013 229 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 ADAM22Q9P0K1 906 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 TBC1D29Q9UFV1 150 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 HOOK1Q9UJC3 728 aaKnown RBP4.51□□□□□ -1.69
CKS1B-207ENST00000477676 TLK1Q9UKI8 766 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 PPIL1Q9Y3C6 166 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 RPS6KL1Q9Y6S9 549 aa4.51□□□□□ -1.69
CKS1B-207ENST00000477676 MN1Q10571 1320 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 A1L4Q6 167 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 ARHGAP42A6NI28 874 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 DFFAO00273 331 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 EEF2KO00418 725 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 KIF1CO43896 1103 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 NRP2O60462 931 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 ASMTLO95671 621 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 CLDN1O95832 211 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 C9P02748 559 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 ATP1A1P05023 1023 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 TCN2P20062 427 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 POU3F2P20265 443 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 IL1R2P27930 398 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 DLSTP36957 453 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 WNT3AP56704 352 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 TPI1P60174 286 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 MAXP61244 160 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 AP1S1P61966 158 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 PPP1CAP62136 330 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 UBE2IP63279 158 aaKnown RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 IL10RBQ08334 325 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 NFATC2Q13469 925 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 ERV3-1Q14264 604 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 KRT31Q15323 416 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 NADK2Q4G0N4 442 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 TCP11X2Q5H9J9 407 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 CT47A1Q5JQC4 288 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 CFAP58Q5T655 872 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 LRRC66Q68CR7 880 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 TXNRD3NBQ6F5E7 133 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 RAET1GQ6H3X3 334 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 IYDQ6PHW0 289 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 WDR74Q6RFH5 385 aaPredicted RBP4.5□□□□□ -1.69
CKS1B-207ENST00000477676 CEACAM20Q6UY09 585 aa4.5□□□□□ -1.69
CKS1B-207ENST00000477676 ASB18Q6ZVZ8 466 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms