RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 LYSMD1Q96S90 227 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 CEP44Q9C0F1 390 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 KIF26AQ9ULI4 1882 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-221ENST00000477203 SMIM31A0A1B0GVY4 71 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 CARNS1A5YM72 827 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 CFAP99D6REC4 459 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 SLC9A3R1O14745 358 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-221ENST00000477203 PDYNP01213 254 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC7-221ENST00000477203 CHN2P52757 468 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 TMEM115Q12893 351 aaPredicted RBP13.06□□□□□ -0.32
HDAC7-221ENST00000477203 PCBP2Q15366 365 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC7-221ENST00000477203 ANKDD1AQ495B1 522 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 GTDC1Q4AE62 458 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 XKR7Q5GH72 579 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 SLC7A5P1Q8MH63 180 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 SAMD11Q96NU1 681 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 ACAT2Q9BWD1 397 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 ELOVL6Q9H5J4 265 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 PLAGL1Q9UM63 463 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 AP4S1Q9Y587 144 aa13.06□□□□□ -0.32
HDAC7-221ENST00000477203 MYO10Q9HD67 2058 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 RECQL5O94762 991 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 STARD3Q14849 445 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 SAMD4BQ5PRF9 694 aaKnown RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 LYPLAL1Q5VWZ2 237 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 TMEM214Q6NUQ4 689 aaKnown RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 ERAP2Q6P179 960 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PATL1Q86TB9 770 aaKnown RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 GPR65Q8IYL9 337 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 KIAA2013Q8IYS2 634 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 TMEM159Q96B96 161 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PDLIM5Q96HC4 596 aaKnown RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 ASB16Q96NS5 453 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 TRIM54Q9BYV2 358 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PLA2G2FQ9BZM2 168 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PARVBQ9HBI1 364 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 LRRK1Q38SD2 2015 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 LATO43561 262 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PRAMEF4O60810 478 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PCNAP12004 261 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 UQCRBP14927 111 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 TACR1P25103 407 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 MAP4P27816 1152 aaKnown RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 OXTRP30559 389 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 TMED10P49755 219 aaKnown RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 MEF2AQ02078 507 aaPredicted RBP13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PGS1Q32NB8 556 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 SPANXN4Q5MJ08 99 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 PRAMEF9Q5VWM5 478 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 ASB9Q96DX5 294 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 APOLD1Q96LR9 279 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 SLC6A17Q9H1V8 727 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 ACTL8Q9H568 366 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 DLGAP4Q9Y2H0 992 aa13.05□□□□□ -0.32
HDAC7-221ENST00000477203 C1QCP02747 245 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 EPORP19235 508 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 GPR1P46091 355 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 ACADVLP49748 655 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 LIPEQ05469 1076 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 CHIT1Q13231 466 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PRKG2Q13237 762 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PPP2R2DQ66LE6 453 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 ANKRD26P1Q6NSI1 321 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 SUSD1Q6UWL2 747 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 TRMT11Q7Z4G4 463 aaKnown RBP13.04□□□□□ -0.32
HDAC7-221ENST00000477203 SMARCD2Q92925 531 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 TMEM181Q9P2C4 612 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 A0A1W2PP18 115 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 DYTNA2CJ06 578 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 ARHGEF33A8MVX0 844 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 MANBAO00462 879 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 WNT9AO14904 365 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 SGTAO43765 313 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PCDH8O95206 1070 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 FGF19O95750 216 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 GBAP04062 536 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 TFAP2AP05549 437 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 IL12RB1P42701 662 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 FOLH1Q04609 750 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PDE12Q6L8Q7 609 aaKnown RBP13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PDSS2Q86YH6 399 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PHACTR4Q8IZ21 702 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 CHPFQ8IZ52 775 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 GPR156Q8NFN8 814 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 GANCQ8TET4 914 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 GLYATL1Q969I3 302 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 DCUN1D5Q9BTE7 237 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 THUMPD3Q9BV44 507 aaKnown RBP13.04□□□□□ -0.32
HDAC7-221ENST00000477203 NUSAP1Q9BXS6 441 aaKnown RBP13.04□□□□□ -0.32
HDAC7-221ENST00000477203 DYRK4Q9NR20 520 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PCYT1BQ9Y5K3 369 aaPredicted RBP13.04□□□□□ -0.32
HDAC7-221ENST00000477203 PCM1Q15154 2024 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 DFNA5O60443 496 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 CLDN9O95484 217 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 NAT1P18440 290 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 SLC5A2P31639 672 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 MMP12P39900 470 aa13.04□□□□□ -0.32
HDAC7-221ENST00000477203 ZFP36L2P47974 494 aaKnown RBP13.04□□□□□ -0.32
HDAC7-221ENST00000477203 GSK3BP49841 420 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms