RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 FOPNLQ96NB1 174 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 TRAPPC9Q96Q05 1148 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 OR6C1Q96RD1 312 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CD180Q99467 661 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 PKP4Q99569 1192 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 DDA1Q9BW61 102 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 PITPNM3Q9BZ71 974 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 SPRY4Q9C004 299 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CDC42EP4Q9H3Q1 356 aaKnown RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 CAB39LQ9H9S4 337 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 FBXO8Q9NRD0 319 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 C1GALT1Q9NS00 363 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 TAS2R13Q9NYV9 303 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 NINJ2Q9NZG7 142 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 OR6C2Q9NZP2 312 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 TRMT6Q9UJA5 497 aaKnown RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 MTO1Q9Y2Z2 717 aaKnown RBP9.37□□□□□ -0.91
HDAC3-208ENST00000476739 VWA7Q9Y334 891 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 PCDHGA3Q9Y5H0 932 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 SPTBP11277 2137 aa9.37□□□□□ -0.91
HDAC3-208ENST00000476739 ANKRD12Q6UB98 2062 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 A0A087WV48 116 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 TEX51A0A1B0GUA7 166 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 A0A1W2PPV9 198 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 GFYI3L273 518 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 MYO1CO00159 1063 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 MATN2O00339 956 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 PRICKLE3O43900 615 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 NRP2O60462 931 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 ZBTB11O95625 1053 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 RPN2P04844 631 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 CTSBP07858 339 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 GSTA2P09210 222 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 CBSLP0DN79 551 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 ENO3P13929 434 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 CBSP35520 551 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 GMPRP36959 345 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 RAB15P59190 212 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 HSD11B2P80365 405 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 CBX1P83916 185 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 DCAF12Q5T6F0 453 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 PRAMEF17Q5VTA0 474 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 UGT3A1Q6NUS8 523 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 C19orf48Q6RUI8 117 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 MBOAT1Q6ZNC8 495 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 UBE2R2Q712K3 238 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 TIPARPQ7Z3E1 657 aaKnown RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 DTX1Q86Y01 620 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 RELL1Q8IUW5 271 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 CTAGE3PQ8IX95 158 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 SPACA3Q8IXA5 215 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 GSPT2Q8IYD1 628 aaKnown RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 PPM1NQ8N819 430 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 ZNF248Q8NDW4 579 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 OR9A1PQ8NGU1 263 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 ANKRD49Q8WVL7 239 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 KCNE4Q8WWG9 221 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 ZNF501Q96CX3 271 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 LINGO1Q96FE5 620 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 FMO2Q99518 471 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 RBBP8Q99708 897 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 RHOJQ9H4E5 214 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 FAM60AQ9NP50 221 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 GEMIN8Q9NWZ8 242 aaKnown RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 MTRF1LQ9UGC7 380 aaKnown RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 ACSL6Q9UKU0 697 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 SLC39A10Q9ULF5 831 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 CORO1CQ9ULV4 474 aaPredicted RBP9.36□□□□□ -0.91
HDAC3-208ENST00000476739 NFU1Q9UMS0 254 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 BTRCQ9Y297 605 aa9.36□□□□□ -0.91
HDAC3-208ENST00000476739 USP24Q9UPU5 2620 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 AHCTF1Q8WYP5 2266 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 DMXL2Q8TDJ6 3036 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 A0A0J9YY10 115 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 EIF3FO00303 357 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 POLR1CO15160 346 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 KLK10O43240 276 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 WISP3O95389 354 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 ACSL3O95573 720 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 SLC16A8O95907 504 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 SYF2O95926 243 aaKnown RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 CATP04040 527 aaKnown RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 FAM153BP0C7A2 387 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 MYBL2P10244 700 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 ERGP11308 486 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 FGF5P12034 268 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 ZNF37AP17032 561 aaPredicted RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 STX2P32856 288 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 GP5P40197 560 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 CCNFP41002 786 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 SKIV2L2P42285 1042 aaKnown RBP9.35□□□□□ -0.91
HDAC3-208ENST00000476739 GABRA4P48169 554 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 TLE3Q04726 772 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 TUBB3Q13509 450 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 KIR2DS3Q14952 304 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 CYP2A13Q16696 494 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 PHKG1Q16816 387 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 SLC5A12Q1EHB4 618 aa9.35□□□□□ -0.91
HDAC3-208ENST00000476739 ZXDCQ2QGD7 858 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms