RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 LRP8Q14114 963 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 PTK2BQ14289 1009 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 XKR7Q5GH72 579 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 TPRG1LQ5T0D9 272 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 TMEM198Q66K66 360 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 CAPN13Q6MZZ7 669 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 RNF165Q6ZSG1 346 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 CHSY3Q70JA7 882 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 LARP4Q71RC2 724 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■■□□□ 13
TRAF4-210ENST00000475329 MYLK4Q86YV6 388 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 TREML1Q86YW5 311 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 SYTL1Q8IYJ3 562 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 CPSF7Q8N684 471 aaKnown RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 OR13H1Q8NG92 308 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 OR5K2Q8NHB8 316 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 ZNF480Q8WV37 535 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 PTCD3Q96EY7 689 aaKnown RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 SPACA7Q96KW9 195 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 C3orf30Q96M34 536 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 C12orf66Q96MD2 445 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 SPATA7Q9P0W8 599 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 POLG2Q9UHN1 485 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 TAGLN3Q9UI15 199 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 LNPEPQ9UIQ6 1025 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 G3BP2Q9UN86 482 aaKnown RBP13.34□□□□□ -0.27
TRAF4-210ENST00000475329 RNF11Q9Y3C5 154 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 PLEKHM1Q9Y4G2 1056 aa13.34□□□□□ -0.27
TRAF4-210ENST00000475329 ATP6AP2A0A1C7CYW4 349 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 ZNF839A8K0R7 811 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 CLGNO14967 610 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 UBDO15205 165 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 UGDHO60701 494 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 ATP6AP2O75787 350 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 DNAJC8O75937 253 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 RASGRP1O95267 797 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 KRT6AP02538 564 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 KRT6BP04259 564 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 DCNP07585 359 aaKnown RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 LBPP18428 481 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 PRDX6P30041 224 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 HSD17B2P37059 387 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 CXCL12P48061 93 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 KRT6CP48668 564 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 PXNP49023 591 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 HTR6P50406 440 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 PNLIPRP1P54315 467 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 ZXDAP98168 799 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 KLF10Q13118 480 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 SQLEQ14534 574 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 ARHGAP19Q14CB8 494 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 ALG11Q2TAA5 492 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 TCHHL1Q5QJ38 904 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 IL27RAQ6UWB1 636 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 RD3Q7Z3Z2 195 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 TBC1D21Q8IYX1 336 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 RAB42Q8N4Z0 105 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 FRMD1Q8N878 549 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 L3MBTL4Q8NA19 623 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 PPFIBP2Q8ND30 876 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 PHC3Q8NDX5 983 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 TSACCQ96A04 125 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 TUBGCP3Q96CW5 907 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 MARK4Q96L34 752 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 INSM2Q96T92 566 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 AKTIPQ9H8T0 292 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 CCDC177Q9NQR7 707 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 GPRC5BQ9NZH0 403 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 WDR37Q9Y2I8 494 aa13.33□□□□□ -0.28
TRAF4-210ENST00000475329 TDRKHQ9Y2W6 561 aaKnown RBP13.33□□□□□ -0.28
TRAF4-210ENST00000475329 SLC28A1O00337 649 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 MANBAO00462 879 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 FFAR3O14843 346 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 SCAMP1O15126 338 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 AXIN1O15169 862 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 GPR42O15529 346 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 THEGLP0DJG4 465 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 ERGP11308 486 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 EZRP15311 586 aaKnown RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 CCND1P24385 295 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 CD27P26842 260 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 PIK3R1P27986 724 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 HALP42357 657 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 ATP4BP51164 291 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 STX1BP61266 288 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 IRX1P78414 480 aaPredicted RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 IRF8Q02556 426 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 CHIT1Q13231 466 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 GRB7Q14451 532 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 NAA25Q14CX7 972 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 UAP1L1Q3KQV9 507 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 LIPJQ5W064 366 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 DUS1LQ6P1R4 473 aaKnown RBP13.32□□□□□ -0.28
TRAF4-210ENST00000475329 SCIMPQ6UWF3 145 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 SLC36A4Q6YBV0 504 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 SPATA19Q7Z5L4 167 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 HID1Q8IV36 788 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 SLC22A18ASQ8N1D0 253 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 CADM4Q8NFZ8 388 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 KLHL29Q96CT2 875 aa13.32□□□□□ -0.28
TRAF4-210ENST00000475329 CMTM5Q96DZ9 223 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms