RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 TK2O00142 265 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 HAUS5O94927 633 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 ITGB2P05107 769 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 MSL3P1P0C860 447 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 CUL1Q13616 776 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 ZIC1Q15915 447 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 DEFB110Q30KQ9 67 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 PRAMEF17Q5VTA0 474 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 FAM20CQ8IXL6 584 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 C2CD4AQ8NCU7 369 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-223ENST00000475146 GIMAP7Q8NHV1 300 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 CT55Q8WUE5 264 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 CERS2Q96G23 380 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 SLC30A3Q99726 388 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 SLC7A5P2Q9GIP4 190 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 TWSG1Q9GZX9 223 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 FAM60AQ9NP50 221 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-223ENST00000475146 SERTAD3Q9UJW9 196 aa23.18■■□□□ 1.3
CPNE1-223ENST00000475146 MRPS18BQ9Y676 258 aaKnown RBP23.18■■□□□ 1.3
CPNE1-223ENST00000475146 NDC80O14777 642 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 NKX2-8O15522 239 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 VPS26AO75436 327 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 KATNA1O75449 491 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 MATN4O95460 622 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 PRB1P04280 392 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 TCN2P20062 427 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 F8A1P23610 371 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 RPL21P46778 160 aaKnown RBP23.17■■□□□ 1.3
CPNE1-223ENST00000475146 ITGA1P56199 1179 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 MC1RQ01726 317 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 DNASE1L3Q13609 305 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 LY6DQ14210 128 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 LRRC39Q96DD0 335 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 GPR21Q99679 349 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 AARSD1Q9BTE6 412 aaKnown RBP23.17■■□□□ 1.3
CPNE1-223ENST00000475146 MED16Q9Y2X0 877 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 PCDHB3Q9Y5E6 796 aa23.17■■□□□ 1.3
CPNE1-223ENST00000475146 IGSF10Q6WRI0 2623 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 FAM187AA6NFU0 413 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 ARHGEF33A8MVX0 844 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 E7EQ34 232 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 CATP04040 527 aaKnown RBP23.16■■□□□ 1.3
CPNE1-223ENST00000475146 MAGP20916 626 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 CARSP49589 748 aaKnown RBP23.16■■□□□ 1.3
CPNE1-223ENST00000475146 CDC20Q12834 499 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 GPS2Q13227 327 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 SF1Q15637 639 aaKnown RBP23.16■■□□□ 1.3
CPNE1-223ENST00000475146 TBR1Q16650 682 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 C16orf46Q6P387 395 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 ANKMY2Q8IV38 441 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 SPNS2Q8IVW8 549 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 GPR135Q8IZ08 494 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 BBOF1Q8ND07 529 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 INPP5DQ92835 1189 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 MR1Q95460 341 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 CLIP3Q96DZ5 547 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 NDNQ99608 321 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 WDR83Q9BRX9 315 aaKnown RBP23.16■■□□□ 1.3
CPNE1-223ENST00000475146 DPH5Q9H2P9 285 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 ACTR5Q9H9F9 607 aaPredicted RBP23.16■■□□□ 1.3
CPNE1-223ENST00000475146 FAM114A2Q9NRY5 505 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 IRAK4Q9NWZ3 460 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 SPATA7Q9P0W8 599 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 KLHL42Q9P2K6 505 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 SLC17A6Q9P2U8 582 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 KCND3Q9UK17 655 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 KLHL20Q9Y2M5 609 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 TEX264Q9Y6I9 313 aa23.16■■□□□ 1.3
CPNE1-223ENST00000475146 KLK3P07288 261 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-223ENST00000475146 PDIA2Q13087 525 aaKnown RBP23.15■■□□□ 1.3
CPNE1-223ENST00000475146 LINC00303Q3SY05 128 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.15■■□□□ 1.3
CPNE1-223ENST00000475146 FAM199XQ6PEV8 388 aaPredicted RBP23.15■■□□□ 1.3
CPNE1-223ENST00000475146 NEK10Q6ZWH5 1172 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 MAATS1Q7Z4T9 603 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 CNTN4Q8IWV2 1026 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 CPNE9Q8IYJ1 553 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 CD200R1Q8TD46 325 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 PLAC1Q9HBJ0 212 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 INTS7Q9NVH2 962 aaKnown RBP23.15■■□□□ 1.3
CPNE1-223ENST00000475146 TRMT6Q9UJA5 497 aaKnown RBP23.15■■□□□ 1.3
CPNE1-223ENST00000475146 DHRS7Q9Y394 339 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 MGAQ8IWI9 3026 aa23.15■■□□□ 1.3
CPNE1-223ENST00000475146 C21orf140B9A014 251 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 TERTO14746 1132 aaKnown RBP23.14■■□□□ 1.29
CPNE1-223ENST00000475146 TP73O15350 636 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 RAD51CO43502 376 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 PSIP1O75475 530 aaKnown RBP23.14■■□□□ 1.29
CPNE1-223ENST00000475146 OR2B3O76000 313 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 ENO3P13929 434 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-223ENST00000475146 OAS2P29728 719 aaKnown RBP23.14■■□□□ 1.29
CPNE1-223ENST00000475146 CALCOCO2Q13137 446 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 TRMT10BQ6PF06 316 aaKnown RBP23.14■■□□□ 1.29
CPNE1-223ENST00000475146 KIAA0408Q6ZU52 694 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 SLC38A9Q8NBW4 561 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 OR9A1PQ8NGU1 263 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 DENND1AQ8TEH3 1009 aa23.14■■□□□ 1.29
CPNE1-223ENST00000475146 C16orf45Q96MC5 204 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-223ENST00000475146 CATSPER2Q96P56 530 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms